Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04804 ATGACCAACGAGGAAACAGTGGCAGCTGCACTACCAATGCAAGAACATTGGTTGCCACTATCAAATCTTGATTTGATTCTTCCTCCTGTTGATGTTAGTGTGTTCTTTTGCTACAATAAACCTATAATTACTATCGGCACCCACCATAATATTATTGAGTGTTTGAAAAATTCATTAGCTGAGACTCTTGTTTCTTATTATGCCTTTGCTGGTGAAGTGGTGAAAAATTCCATGGGTGAACCTGAGTTACTTTGCAATAACCGTGGTGTTGATTTTGTTGAAGCTTTTGCTGATGTTGAATTACAATCTCTTAATTTGTATAATCCAGATGAAAGTGTTGAAGGGAAACTTGTTCCAAAGAAGAAACATGGTGTTCTTGCTGTTCAGGTAACATGGATGAAATGTGGTGGATTAGTAGTGGCATGCACTTTTGACCATCGTATAGCGGATGCCTATTCTGCAAATATGTTCCTTGTATCTTGGGCCGAGATAGCCCGATACAAGAATAACAAATCATTCATTCCGACAACACAACCTTGTTTTCGGAGATCTCTTTTGACCCCACGACGCCCACCTTCCATCCATCCTTCACTTTATGACATGTACGTCCCCCTCTCTGATCTACCTCCTCCACCTGCACCTGAGCTTGAATCCGATATTAAAACTGATCCAATAATAAGTCGCATATACTATGTAACAAGTGAAGAACTAGATAACATGCAATCACAAGCCAACTCAAACAATAGTGGCAGTGTTAAGCGGTCAAAACTTGAATCATTTTCTGCTTTACTGTGGAAGATGGTTGCCGCGGCGGCTTCAACTGATAATGAAAATGTCGTTGCGAAAATCGGGTTGGTTGTTGATGGAAGAAAGAGGCTAAGCAACGGTGACAAAAACAAGGAAGAGATTATGAGCTCTTATTTTGGGAATGTGCTCTCAATTCCCTATGGTGGTAGATTAGCGAACGAGTTGGTTGAAAATCCAATAAGTTGGGTGGCAGACCGAGTTCATAATTTTTTGGAGGAGGCTTTGACGGAGGAGCATTTCTTAGGACTAATTGATTGGGTGGAAGAGCATCGACCAGTTCCAGGGTGGCCGAGGATATATTGTGGAAGCACTAGTGGAGAAGAGGGCCCGGCATTTGTTGTGTCATCCGGCCAACGGTTTCCGGAGTCGAAGGTGGATTTTGGATGGGGGAAGCCTGTGCTTGGATCTTATCATTTTCCTTGGGGTGGACCAGGTGGTGATACTGGATATGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTGCTCTATATGCACCTTCCTAAGACACACTTGCACTACATGGAGGCTCGAGCTCCCCATTTCTTTAGACCAATCTCTTGGGATTACCTTCTCAATTAA 1395 0.4272 MTNEETVAAALPMQEHWLPLSNLDLILPPVDVSVFFCYNKPIITIGTHHNIIECLKNSLAETLVSYYAFAGEVVKNSMGEPELLCNNRGVDFVEAFADVELQSLNLYNPDESVEGKLVPKKKHGVLAVQVTWMKCGGLVVACTFDHRIADAYSANMFLVSWAEIARYKNNKSFIPTTQPCFRRSLLTPRRPPSIHPSLYDMYVPLSDLPPPPAPELESDIKTDPIISRIYYVTSEELDNMQSQANSNNSGSVKRSKLESFSALLWKMVAAAASTDNENVVAKIGLVVDGRKRLSNGDKNKEEIMSSYFGNVLSIPYGGRLANELVENPISWVADRVHNFLEEALTEEHFLGLIDWVEEHRPVPGWPRIYCGSTSGEEGPAFVVSSGQRFPESKVDFGWGKPVLGSYHFPWGGPGGDTGYVMPMPSPKRNGDWLLYMHLPKTHLHYMEARAPHFFRPISWDYLLN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04804 464 Pfam Transferase family 2 448 - -
Trre9g04804 464 Gene3D - 213 448 IPR023213 -
Trre9g04804 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 425 - -
Trre9g04804 464 Gene3D - 1 200 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04804 Trre-Chr9 54706624 54708334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04804 8 447 Monolignol Biosynthesis Gene Families AT5G48930 25.333 6.66e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04804 - - gmx:100809201 633.254