Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04802 ATGTGTATTGGAAAATTTGGATTCATTGTGAATGTGACCAACGAGGAAACAGTGGCAGCTGCACTACCAATGCAAGAACATTGGTTGCCACTATCAAATCTTGATTTGATTCTTCCTCCTGTTGATGTTAGTGTGTTCTTTTGCTACAATAAACCTATAATTACTATTGGCACCCACCATAATATTGTTGAGTGTTTGAAAAATTCATTAGCTGAGACTCTTGTTTCTTATTATGCCTTTGCTGGTGAAGTGGTGAAAAATTCCATGGGTGAACCTGAGTTACTTTGCAATAACCGTGGTGTTGATTTTGTTGAAGCTTTTGCTGATGTTGAATTACAATCTCTTAATTTGTATAATCCAGATGAAAGTGTTGAAGGGAAACTTGTTCCAAAGAAGAAACATGGTGTTCTTGCTGTTCAGGCAACATGGATGAAATGTGGTGGATTAGTAGTGGCATGTACTTTTGACCATCGTATAGCGGATGCCTATTCTACAAATATGTTCCTTGTATCTTGGGCCGAGATAGCCCGACTCAAGAATAACAAATCATTCATTCCAACAACACAACCTTGTTTTCGGAGATCTCTTTTGACCCCACGACACCCACCTTCCATCCATCCTTCACTTTATGACATGTACGTCCCCCTCTCTGATCTACCTCCTCCACCTGCACCTGAGCTTGAATCTGATATTAAAACTGATCCAATAATAAGTCGCATATACTATGTAACAAGTGAAGAACTAAACAACATGCAATCACAAGCCAACTCAAACAATAGTGGCATTAAGCGGTCAAAACTTGAATCATTTTCTGCTTTACTGTGGAAGATGGTTGCCGCGGCGGCTTCAACTGATAATGAAAATATCGTTGCAAAAATGGGGTTGGTTGTTGATGGAAGAAAGAGGCTATGCAACGGTGACAAAAACAAGGAAGAGATTATGAGCTCATATTTCGGGAATGTGCTCTCAATTCCCTATGGTGGTAGATTGGCGAACGAGTTGGTTGAAAATTCATTAAGTTGGGTGGCAGACCGAGTTCATAATTTTTTGGAGGAGGCACTGACGGAGGAGCATTTCTTGGGACTAATTGATTGGGTGGAAGAGCATCGACCAGTTCCAGGGTTGGCGAGGATATATTGTGGTAGCACTGGTGGAGAAGAGGGCCCGACATTTGTTGTGTCATCCGGCCAACGGTTTCCGGAGTCAAAGGTGGATTTTGGATGGGGGAAGCCTGTGCTTGGATCTTATCATTTTCCTTGGGGTGGACCGGGTGGTGGTGCAGGATATGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTGCTCTATATGCACCTTCCTAAGACACACTTGCACTACATGGAGGCTCGAGCTCCCCATTTCTTTAGACCAATCTCTTGGGATTACCTTCTCAATTAA 1425 0.4232 MCIGKFGFIVNVTNEETVAAALPMQEHWLPLSNLDLILPPVDVSVFFCYNKPIITIGTHHNIVECLKNSLAETLVSYYAFAGEVVKNSMGEPELLCNNRGVDFVEAFADVELQSLNLYNPDESVEGKLVPKKKHGVLAVQATWMKCGGLVVACTFDHRIADAYSTNMFLVSWAEIARLKNNKSFIPTTQPCFRRSLLTPRHPPSIHPSLYDMYVPLSDLPPPPAPELESDIKTDPIISRIYYVTSEELNNMQSQANSNNSGIKRSKLESFSALLWKMVAAAASTDNENIVAKMGLVVDGRKRLCNGDKNKEEIMSSYFGNVLSIPYGGRLANELVENSLSWVADRVHNFLEEALTEEHFLGLIDWVEEHRPVPGLARIYCGSTGGEEGPTFVVSSGQRFPESKVDFGWGKPVLGSYHFPWGGPGGGAGYVMPMPSPKRNGDWLLYMHLPKTHLHYMEARAPHFFRPISWDYLLN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04802 474 Gene3D - 224 458 IPR023213 -
Trre9g04802 474 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 435 - -
Trre9g04802 474 Pfam Transferase family 10 458 - -
Trre9g04802 474 Gene3D - 9 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04802 Trre-Chr9 54695652 54697413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04802 10 457 Monolignol Biosynthesis Gene Families AT5G48930 24.672 8.96e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04802 - - gmx:100809201 638.647