Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04801 ATGTGTATTGGAAAAGTTGGATTCATTGTGAATGTGACCAACGAGGAAACAGTGGCAGCTGCACTACCAATGCAAGAACATTGGTTGCCACTATCAAATCTTGATTTGATTCTTCCTCCTGTTGATGTTAGTGTGTTCTTTTGCTACAATAAACCTACAATTACTATTGGCACCCACCATAATATTATTGAGTGTTTGAAAAATTCATTAGCTGAGACTCTTGTTTCTTATTATGCCTTTGCTGGTGAAGTGGTGAAAAATTCCATGGGTGAACCTGAGTTACTTTGCAATAACCGTGGTGTTGATTTTGTTGAAGCTTTTGCTGATGTTGAATTACAATCTCTTAATTTGTATAATCCAGATGAAAGTGTTGAAGGGAAGCTTGTTCCAAAGAAGAAACATGGTGTTCTTGCTGTTCAGGCAACATGGATGAAATGTGGCGGATTAGTAGTGGCTTGCACTTTTGACCATCGCATAGCAGATGCCTATTCTGCAAATATGTTCTTTGTATCTTGGGCCGAGATAGCCCGGCCCAAGAATAACAAATCTTTCATTCCAACAACACAGCCATGTTTTCGGAGATCTCTTTTGACCCCACGACGCCCACCTTCCATCCATCCTTCACTTTATGAGATGTACGTCCCCGTCTCTGATCTACCTCCTCCACCTGTACCTGAGCTTGAATCCGATATTAAAACTGATCCAATAATAAGTCGCATATACTACGTAACAGGTGAAGAACTCAACAACATGCAATCACTAGCCAACTCAAACAATATTGGCAGTGTTAAGCGGTCAAAACTTGAATCGTTTTCTGCTTTATTGTGGAAGATGGTTGCTGAGGCCGCTTCAACCAATAATGAAAATATTGTTGCAAAAATGGGGTTAGTTGTTGATGGAAGAAAGAGGCTAAGCAACGGTGACAAAAACAAGGAAGAGATTATGAGTTCGTATTTTGGGAACGTGCTTTCAATTCCCTACGGTGGTAGATTGGCGAACGAATTGGTTGAAAATCCATTAAGTTGGGTGGCAAACCGAGTTCATGATTTTTTAGAGGAGGCAGTGACGGAGGAGCATTTCTTAGGACTAATTGATTGGGTGGAAGAGCATCGACCGGTTCCAGGGTTGGCGAGGATTTATTGTGGTAGCACCGGTGGAGAAGAGGGCCCGACATTTGTTGTGTCATCCGGCCAACGGTTTCCGGAGTCGAAGGTGGATTTTGGATGGGGGAAGCCTGTGCTTGGATCTTATCATTTCCCTTGGGGTGGTGATGCTGGATATGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTGCTCTATATGCACCTTCCTAAGACACACTTGCACTACATGGAGGCTCGAGCTCCCCATTTCTTTAGACCAATCTCTTGGGATTACCTTCTCAATTAA 1419 0.4264 MCIGKVGFIVNVTNEETVAAALPMQEHWLPLSNLDLILPPVDVSVFFCYNKPTITIGTHHNIIECLKNSLAETLVSYYAFAGEVVKNSMGEPELLCNNRGVDFVEAFADVELQSLNLYNPDESVEGKLVPKKKHGVLAVQATWMKCGGLVVACTFDHRIADAYSANMFFVSWAEIARPKNNKSFIPTTQPCFRRSLLTPRRPPSIHPSLYEMYVPVSDLPPPPVPELESDIKTDPIISRIYYVTGEELNNMQSLANSNNIGSVKRSKLESFSALLWKMVAEAASTNNENIVAKMGLVVDGRKRLSNGDKNKEEIMSSYFGNVLSIPYGGRLANELVENPLSWVANRVHDFLEEAVTEEHFLGLIDWVEEHRPVPGLARIYCGSTGGEEGPTFVVSSGQRFPESKVDFGWGKPVLGSYHFPWGGDAGYVMPMPSPKRNGDWLLYMHLPKTHLHYMEARAPHFFRPISWDYLLN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04801 472 Gene3D - 225 456 IPR023213 -
Trre9g04801 472 Gene3D - 8 212 IPR023213 -
Trre9g04801 472 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 433 - -
Trre9g04801 472 Pfam Transferase family 10 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04801 Trre-Chr9 54679805 54681567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04801 10 455 Monolignol Biosynthesis Gene Families AT5G48930 24.945 4.87e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04801 - - gmx:100809201 667.537