Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04751 ATGTTGAGAGTTTATCAATTAAGAAGAGTTGGATTGTTGATTCCAAAACTCTCTTCACTTTCAACAATTCCTTCACTCTTCTCTTTTCCTTCTCATTCTCACTCACAAATCCACACTTTTTCATCCACAAAAACCATCCATTTTCAATCACATTCTTCTCTTACTCTTTCACCATTTACTTCTATCAACAAGCCTCCCGAATCAACAGCTTCATATAGCACTGAAGGTGGTAGGGAAAGGGAAATATTGATGCAACATTTGTTGGTGAAAGAAGATGATCAGGAACTATTGTTGGATCTTCAAAAGAGAATCTCTGCAGGTGAAGATTTGAAGGATCTTGCTGTGGACCATTCAATTTGCCCTTCAAAAGATGAAGGAGGAGTGCTAGGGTGGGTGAGAAAGGGACAAATGGTTCCTGAACTTGAGGAGGCTGTGTTTAATGCACCTTTAAACAAAGTTGTAATGTGTAAGACAGAATTTGGATGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAGTCTGTATTTCAAGACATTCAACCTGATGAGCTGCATGTGAAACTTCAAGATCCTAACTTTTCGGAGAAGGCGCAGTTAATCGATATTCGAGAGCCTCAAGAAGTGGAGAAAGCATCTTTGCCAGGTTTTAAGGTTCTTTCCCTTCTACAATTTGGAACATGGGGGCCTGAGATAAACTCCAAATTTGATCTTCAAAAGGATACCTATGTTCTGTGTCATCACGGCATACGGTCGTTACAGGTTGCCAGATGGTTGCAGTCAAAGGGGTTCAGGAAAGTATACAATATTTTTGGAGGAATCCATGCCTATGCGGAGCAGGTCAATCCGTCGGTTCCTACATACAAGAGAGAAAATTTCGGTGACAGAACTCCGTTCAATATTTTAGCAGGTCACCCTTTCAAAACTGTCAACTTTTACATGAGAGGCAAGGCATCCGATGGTCGCAAATAA 969 0.4097 MLRVYQLRRVGLLIPKLSSLSTIPSLFSFPSHSHSQIHTFSSTKTIHFQSHSSLTLSPFTSINKPPESTASYSTEGGREREILMQHLLVKEDDQELLLDLQKRISAGEDLKDLAVDHSICPSKDEGGVLGWVRKGQMVPELEEAVFNAPLNKVVMCKTEFGWHLLQVLSEREESVFQDIQPDELHVKLQDPNFSEKAQLIDIREPQEVEKASLPGFKVLSLLQFGTWGPEINSKFDLQKDTYVLCHHGIRSLQVARWLQSKGFRKVYNIFGGIHAYAEQVNPSVPTYKRENFGDRTPFNILAGHPFKTVNFYMRGKASDGRK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04751 322 SMART rhod_4 179 282 IPR001763 -
Trre9g04751 322 Pfam PPIC-type PPIASE domain 91 169 - -
Trre9g04751 322 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 174 289 IPR036873 -
Trre9g04751 322 Gene3D - 173 299 IPR036873 -
Trre9g04751 322 Gene3D - 77 172 IPR046357 GO:0003755
Trre9g04751 322 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 287 - -
Trre9g04751 322 ProSiteProfiles Rhodanese domain profile. 193 285 IPR001763 -
Trre9g04751 322 Pfam Rhodanese-like domain 194 278 IPR001763 -
Trre9g04751 322 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 79 169 IPR000297 GO:0003755
Trre9g04751 322 SUPERFAMILY FKBP-like 80 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04751 Trre-Chr9 54214861 54217957 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04751 80 287 Sulfurtransferasese or Rhodanese AT5G19370 64.423 1.56e-95 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04751 - - mtr:112421875 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g04751 9 54214861 54217957 Trre9g04751 9 54214861 54217957 ECH