Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04749 ATGTTAAGAGTTTCTCAAATTCGTGTTGGATTAGCGATTCCAAAACTCTCTCCACTTTCATCAATTCCTTCACTCTTCTCTTTCTCTTTTCCTTCTCATTCTCACTCTCAAATCCACCACACTTTTTCTTCCACAAAAACCTTCCATTTTCATTCACCTTCTTCTCTTCCTCTTTCACCCTTTACTTCAATCATGTCTCTGAAAGCATCAGCTTCATATAGTAGTGATGTTGAAGGTGGAGGTGAAAGGGAAATATTGGTGCAGCATTTGTTGGTGAAAGAAGATGACCAGAAACTATTATTGGATATTCAAAAGAGAGTTGCTGCAGGTGAAGATTTGAGTGATCTCGCCGTGGACCATTCAATTTGCCCTTCTAAAGATGAGGGTGGAATGCTTGGGTGGGTGAGAAAGGGACAAATGGTTCCTGAATTTGAGGAGGCTGCGTTTAGTGCACCTTTAAACAAAGTTGTAAGATGCAAGACAAAATTTGGATGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAATCAGTACTTCAAGACATTAAACCGGATGAGCTGCATGTGAAATTTCAAGATCCCAACTTTTTGGAGGAGGCACAGTTAATTGATGTTCGCGAGCCTGAAGAAGTGGCCACAGCATCTTTGCCAGGATTTACAGTTCTTCCCCTCCGGCAATTTGGAAGCTGGGGGCCTGAAGTAAACACCAAATTTGACCCTCAAAAGGATACATATGTTCTGTGTCATCACGGCGTGCGGTCGTTACAGGTTGCCAGGTGGTTGCAGTCACAGGGGTTCAGGAAAGTATACAATATTTCTGGAGGAATCCATGCCTATGCAGTTCAGGTCGATCCGTCAGTTCCTACATACTGA 873 0.4307 MLRVSQIRVGLAIPKLSPLSSIPSLFSFSFPSHSHSQIHHTFSSTKTFHFHSPSSLPLSPFTSIMSLKASASYSSDVEGGGEREILVQHLLVKEDDQKLLLDIQKRVAAGEDLSDLAVDHSICPSKDEGGMLGWVRKGQMVPEFEEAAFSAPLNKVVRCKTKFGWHLLQVLSEREESVLQDIKPDELHVKFQDPNFLEEAQLIDVREPEEVATASLPGFTVLPLRQFGSWGPEVNTKFDPQKDTYVLCHHGVRSLQVARWLQSQGFRKVYNISGGIHAYAVQVDPSVPTY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04749 290 Gene3D - 80 175 IPR046357 GO:0003755
Trre9g04749 290 SUPERFAMILY FKBP-like 83 171 - -
Trre9g04749 290 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 290 - -
Trre9g04749 290 Pfam PPIC-type PPIASE domain 92 172 - -
Trre9g04749 290 Pfam Rhodanese-like domain 190 280 IPR001763 -
Trre9g04749 290 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 178 288 IPR036873 -
Trre9g04749 290 ProSiteProfiles Rhodanese domain profile. 196 288 IPR001763 -
Trre9g04749 290 Gene3D - 176 287 IPR036873 -
Trre9g04749 290 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 82 172 IPR000297 GO:0003755
Trre9g04749 290 SMART rhod_4 182 285 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04749 Trre-Chr9 54202582 54205751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04749 83 290 Sulfurtransferasese or Rhodanese AT5G19370 66.346 1.44e-103 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04749 - - aprc:113846694 441.425