Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04729 ATGGAACAGAGAAGAAAATCTTCAACATCATCATCATGGTTTCTTCTATTCTCAATTCTTTCTTGTCTTTTTCTCTCTAATTTCTTAGGATCTGTTGGAGCTTACAAAAATTACACAGTTGGAGATTCTTTAGGCTGGTTTGACAATCTTGAAAAACCTACTGTTAATTATGAGAAGTGGGCTGCCAAGAAACAATTCAGCTTGGGAGATTTCCTCATTTTCAACACAGACAATAACCACTCTCTTGTACAAACATACAACTTCACCACATACAAACTATGTGATTATGATGATGCAATAGACAAGGATACAGTCCAATGGTCATCTGCTGATCCGTCAAACACCGGGATACAACCAGTGACAGTGGCGGTTCCTTTATTGAAGGAAGGAGCGACGTATTTCTTCTCGAGTGATTATGATGGTGAGCAATGCAAAAATGGACAACATTTTAAAATAAATGTGACTCATGGACAAGGGTTGCCAAAGAGTCTTCGATCCTCCGATGATGCTCAATCTCCTATTAGTCCAATTTCTGGTGATGATGAGTCAGCACCGGACACAAATGTACCTTCCAATTTCAATAATCCTAAAGAAGATAAAGACGATGAAAAGAGTACCGACAAAGATGACAAAGATAACGAGAAATCTAATTCTAATTCGTTGTTAAAGTATGCACAACTTCACAACAAGTTGTATGGGTGTCTTGTCTTGTTAGGGACATTTTTCTTGTTTTAG 735 0.3769 MEQRRKSSTSSSWFLLFSILSCLFLSNFLGSVGAYKNYTVGDSLGWFDNLEKPTVNYEKWAAKKQFSLGDFLIFNTDNNHSLVQTYNFTTYKLCDYDDAIDKDTVQWSSADPSNTGIQPVTVAVPLLKEGATYFFSSDYDGEQCKNGQHFKINVTHGQGLPKSLRSSDDAQSPISPISGDDESAPDTNVPSNFNNPKEDKDDEKSTDKDDKDNEKSNSNSLLKYAQLHNKLYGCLVLLGTFFLF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04729 244 MobiDBLite consensus disorder prediction 195 217 - -
Trre9g04729 244 SUPERFAMILY Cupredoxins 36 154 IPR008972 -
Trre9g04729 244 CDD Phytocyanin 36 154 - -
Trre9g04729 244 Pfam Plastocyanin-like domain 46 148 IPR003245 GO:0009055
Trre9g04729 244 MobiDBLite consensus disorder prediction 159 194 - -
Trre9g04729 244 FunFam Early nodulin-like protein 18 35 157 - -
Trre9g04729 244 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Trre9g04729 244 Gene3D - 35 159 IPR008972 -
Trre9g04729 244 ProSiteProfiles Phytocyanin domain profile. 36 156 IPR003245 GO:0009055
Trre9g04729 244 PANTHER BLUE COPPER PROTEIN 36 174 IPR039391 GO:0009055
Trre9g04729 244 MobiDBLite consensus disorder prediction 159 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04729 Trre-Chr9 54035785 54037624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04729 19 244 Phytocyanin Superfamily AT1G08500 56.332 8.35e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04729 - - ccaj:109789262 296.589