Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g04697 | ATGATTATTGATATTCTTATCATTCATCTAATCTCAGGAAATACAAAGATTCAAAGTAAGACAAAGCAGACTTCAAATTCTCCGGACCAAAAAACCGAATTGAAAACTTCTGCATCAAATGATGACTTATCCATCTCCAATAATGTTAAGTCTTTTAGCTTCAATGATCTAAAAGAGGCGACTAGGAACTTCCGGCAAGAAAATTTAATCGGCGAAGGAGGGTTTGGTTTTGTCTTCAAAGGATGGATAGATGAGAACACAGGCGCTCCTACAAAACCCGGAAATGGAATTGTAGTTGCCATTAAGCGGCTTAAACCAGAAAGTTTTCAAGGTCACAAGGAATGGCTTGCAGAAGTCAATTATCTAGGCCAACTTCACCATGAAAATTTGGTGAGGCTTATTGGTTACTGTTCAGAAGGAAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAAAATCACTTATTCAGAAAAGGTGTTCAACCGATTTCCTGGATGACACGGATCAATATTGCGATTGGTGTAGCAAGAGGACTAGCATTCTTACATTCCCTTGACGCAAATGTTATTTATCGTGATTTAAAGGCTTCCAACATCCTACTTGACTCGGATTTCAATGCAAATCTTTCGGATTTTGGCTTAGCAAGAGATGGTCCAACCGGAGATAACACTCATGTTTCAACTCGAATTATCGGAACTCATGGTTATGCCGCACCAGAATATGTAGCCACAGGTCATTTAACAGCAAGGAGCGATGTATACAGCTTCGGCGTTGTCTTGTTAGAGTTACTAACAGGACGGCGTGTAGTTGACGAAGATAGACCTGGATACTCGGAAGACACGCTTGTGGATTGGGCAATGCCTTTTCTAAGTGACAACAGAAGAATATTGAGAATCATGGATACAAAGTTAGGTGGTCAATACTCGAAAAAAGGAGCACAAGCTGCAGCTGCACTTATTCTAAATTGTGTTAATACTGATCCTAAACATAGACCAACTATGGTAGATGTTTTATCGGCATTGGAAGCGTTACATTCGTCAAATTCATTTCCAAGGACACCAAAATCTGGAGCTGATAATCATCATCATGGAACCAAGCATTCTAATCATCATCATCATCATTCACATAAGTCAATTACCAATAATACTAGAAAACATTGA | 1173 | 0.3896 | MIIDILIIHLISGNTKIQSKTKQTSNSPDQKTELKTSASNDDLSISNNVKSFSFNDLKEATRNFRQENLIGEGGFGFVFKGWIDENTGAPTKPGNGIVVAIKRLKPESFQGHKEWLAEVNYLGQLHHENLVRLIGYCSEGKNRLLVYEFMQKGSLENHLFRKGVQPISWMTRINIAIGVARGLAFLHSLDANVIYRDLKASNILLDSDFNANLSDFGLARDGPTGDNTHVSTRIIGTHGYAAPEYVATGHLTARSDVYSFGVVLLELLTGRRVVDEDRPGYSEDTLVDWAMPFLSDNRRILRIMDTKLGGQYSKKGAQAAAALILNCVNTDPKHRPTMVDVLSALEALHSSNSFPRTPKSGADNHHHGTKHSNHHHHHSHKSITNNTRKH | 390 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g04697 | 390 | ProSiteProfiles | Protein kinase domain profile. | 64 | 348 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g04697 | 390 | MobiDBLite | consensus disorder prediction | 18 | 39 | - | - | |
Trre9g04697 | 390 | CDD | STKc_IRAK | 70 | 348 | - | - | |
Trre9g04697 | 390 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 367 | - | - | |
Trre9g04697 | 390 | SMART | serkin_6 | 64 | 348 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g04697 | 390 | SUPERFAMILY | Protein kinase-like (PK-like) | 42 | 346 | IPR011009 | - | |
Trre9g04697 | 390 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672|GO:0006468 | |
Trre9g04697 | 390 | MobiDBLite | consensus disorder prediction | 352 | 390 | - | - | |
Trre9g04697 | 390 | ProSitePatterns | Protein kinases ATP-binding region signature. | 70 | 102 | IPR017441 | GO:0005524 | |
Trre9g04697 | 390 | Pfam | Protein tyrosine and serine/threonine kinase | 67 | 344 | IPR001245 | GO:0004672|GO:0006468 | |
Trre9g04697 | 390 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 150 | 358 | - | - | |
Trre9g04697 | 390 | PANTHER | OS01G0588500 PROTEIN-RELATED | 24 | 349 | - | - | |
Trre9g04697 | 390 | MobiDBLite | consensus disorder prediction | 368 | 390 | - | - | |
Trre9g04697 | 390 | Gene3D | Phosphorylase Kinase; domain 1 | 38 | 149 | - | - | |
Trre9g04697 | 390 | FunFam | Serine/threonine-protein kinase BIK1 | 30 | 149 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g04697 | Trre-Chr9 | 53834966 | 53836644 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre9g04697 | 14 | 345 | Glycoside Hydrolase | AT3G07070 | 48.521 | 5.55e-105 | 314 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Trre9g04697 | PK_Tyr_Ser-Thr | 7.1e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g04697 | - | - | gmx:102664409 | 623.624 |