Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04679 ATGGGGATTCAAACAATGGGTTCTCAAAGTAATGGGCAACAGTCTCATTTACAGGCTAATAATCAGTTAATTAAGCAAAATTCATGGTATGGTCTTACTCTTGATGAGGTTAACAATCTATTAGGAGATTTAGGGAAGCCGTTAGGGAGCATGAATCTCGACGAGCTTCTTCAGAATGTATGGACTGCTGAAGGAAATAACGTTGTAGGAGTAGAGAGCGAGCATGTATCGTCTTCGTCTTCTCTTCAACGTCAGGCTAGTATGACGTTGGCTCGTGCTTTAAGTGGGAAGACGGTGGATGATGTATGGAGAGAAATCCAGCTAGGTCAGAAGAAACAATACGGAGATGATGTGAAAATTGAGGATAGGGAAATGAGTCTTGGTGGTACAACGTTGGAAGATTTTTTAGTACAAGCAGGGCTTTACGCTGGAGCTTCTGTTAGTTCTACGGTGGGGTTAGATGCAATGGATACTGCTATTCCTCAAAGCTTTCAACCGAAAACAAGCTTGTTATCCTCTTCTTCGATTAGTAGTTTGTCAGATGCAAAACCGGGGCGTAAAAGGGATGGACCGGATGCGTATGAGAAGGCTGTAGAAAGGAGGCTGAGAAGGAAAATCAAGAATAGGGAATCTGCTGCTCGTTCACGAGCAAGAAAACAGGCTTACCATAATGAACTGGTTACCAAGGTTACTCTGCTAGAACAGCAAAATACGCAGCTCAAGAAAGAGAAGGAGTTTGAGCAAGGCCTACCACCTGAACCATCATCTGAACCGAAATATCGTCTTCGAAGAATAAGTTCTGCCCATTTCTGA 813 0.4317 MGIQTMGSQSNGQQSHLQANNQLIKQNSWYGLTLDEVNNLLGDLGKPLGSMNLDELLQNVWTAEGNNVVGVESEHVSSSSSLQRQASMTLARALSGKTVDDVWREIQLGQKKQYGDDVKIEDREMSLGGTTLEDFLVQAGLYAGASVSSTVGLDAMDTAIPQSFQPKTSLLSSSSISSLSDAKPGRKRDGPDAYEKAVERRLRRKIKNRESAARSRARKQAYHNELVTKVTLLEQQNTQLKKEKEFEQGLPPEPSSEPKYRLRRISSAHF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04679 270 MobiDBLite consensus disorder prediction 182 196 - -
Trre9g04679 270 Pfam bZIP transcription factor 200 243 IPR004827 GO:0003700|GO:0006355
Trre9g04679 270 SMART brlzneu 196 268 IPR004827 GO:0003700|GO:0006355
Trre9g04679 270 MobiDBLite consensus disorder prediction 171 196 - -
Trre9g04679 270 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 243 IPR004827 GO:0003700|GO:0006355
Trre9g04679 270 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
Trre9g04679 270 Coils Coil 223 243 - -
Trre9g04679 270 SUPERFAMILY Leucine zipper domain 200 246 IPR046347 GO:0003700|GO:0006355
Trre9g04679 270 MobiDBLite consensus disorder prediction 238 270 - -
Trre9g04679 270 CDD bZIP_plant_BZIP46 200 248 - -
Trre9g04679 270 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 198 250 - -
Trre9g04679 270 Gene3D - 198 248 - -
Trre9g04679 270 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 25 265 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04679 Trre-Chr9 53733874 53735939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04679 18 270 bZIP Transcription Factor Family AT3G56850 43.051 1.13e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre9g04679 bZIP_1 4.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04679 K14432 - gmx:100798549 367.081