Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04672 ATGTTGTTGATGATGATGATGAGTGCTATGATGTGGAACATGGCAAAATCTGAGGAACACTTTGTTGGGGGGAATAACCATTCATGGGTAGTTGGTAATAACTTCACCAATTGGTCATTGAATCAACACTTTCATTTGAATGATTGGCTATACTTTGGATATGACAAACGCTATTTCAGTGTGCTAGAGGTGAACAAAACAAGTTATGAAAACTGCATAGATGCAGGATTCATTAAGAACATAACCGGAGGCGCCGGACGAGACGTTTTTCAGCTTACAGAAGAGAAGACTTATTACTTTATAAATCCAGGAGGTTACTGTTGGCAAGGGATGAAGGTTGCCATTGATGTTAATGATTATGCACCAGCTCCTGCACCTACACCTGGTGCTTCTGCTATTAATGCTTCTAATATCTACCATTCACTTTTGGCGCTCATCTTAATCTCGATGTTCACAAGCTTCTTTGGATAA 471 0.397 MLLMMMMSAMMWNMAKSEEHFVGGNNHSWVVGNNFTNWSLNQHFHLNDWLYFGYDKRYFSVLEVNKTSYENCIDAGFIKNITGGAGRDVFQLTEEKTYYFINPGGYCWQGMKVAIDVNDYAPAPAPTPGASAINASNIYHSLLALILISMFTSFFG 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04672 156 PANTHER BLUE COPPER PROTEIN 14 124 IPR039391 GO:0009055
Trre9g04672 156 FunFam Lamin-like protein 16 120 - -
Trre9g04672 156 ProSiteProfiles Phytocyanin domain profile. 18 119 IPR003245 GO:0009055
Trre9g04672 156 Pfam Plastocyanin-like domain 29 111 IPR003245 GO:0009055
Trre9g04672 156 Gene3D - 17 121 IPR008972 -
Trre9g04672 156 SUPERFAMILY Cupredoxins 18 117 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04672 Trre-Chr9 53682857 53684185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04672 1 155 Phytocyanin Superfamily AT2G27035 41.290 1.69e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04672 - - mtr:11434723 196.823