Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04671 ATGGAGGTTTTGAGTTTTACAAAAAACATGTTGTTGATGATGATGATGAGTGCTATGATGTGGAACATGGCAAAATCTGAGGAACACTTTGTTGGGGGGAATAACCATTCATGGGTAGTTGGTAATAACTTCACCAATTGGTCATTGAATCAACACTTTCATTTGAATGATTGGCTATACTTTGGATATGACAAACGCTATTTCAGTGTGCTAGAGGTGAACAAAACAAGTTATGAAAACTGCATAGATGCAGGATTCATTAAGAACATAACCGGAGGCGCCGGACGAGACGTTTTTCAGCTTACAGAAGAGAAGACTTATTACTTTATAAATCCAGGAGGTTACTGTTGGCAAGGGATGAAGGTTGCCATTGATGTTAATGATTATGCACCAGCTCCTGCACCTACACCTGGTGCTTCTGCTATTAATGCTTCTAATATCTACCATTCACTTTTGGCGCTCATCTTAATCTCGATGTTCACAAGCTTCTTTGGATAA 498 0.3916 MEVLSFTKNMLLMMMMSAMMWNMAKSEEHFVGGNNHSWVVGNNFTNWSLNQHFHLNDWLYFGYDKRYFSVLEVNKTSYENCIDAGFIKNITGGAGRDVFQLTEEKTYYFINPGGYCWQGMKVAIDVNDYAPAPAPTPGASAINASNIYHSLLALILISMFTSFFG 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04671 165 PANTHER BLUE COPPER PROTEIN 19 133 IPR039391 GO:0009055
Trre9g04671 165 SUPERFAMILY Cupredoxins 27 126 IPR008972 -
Trre9g04671 165 ProSiteProfiles Phytocyanin domain profile. 27 128 IPR003245 GO:0009055
Trre9g04671 165 FunFam Lamin-like protein 25 129 - -
Trre9g04671 165 Pfam Plastocyanin-like domain 38 120 IPR003245 GO:0009055
Trre9g04671 165 Gene3D - 26 130 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04671 Trre-Chr9 53682857 53684212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04671 4 164 Phytocyanin Superfamily AT2G27035 40.994 1.42e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04671 - - mtr:11434723 196.823