Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04635 ATGCGTCCACCAATGAAGAAAATTGATTACAAAGTTGGAGACAAAGTTGAAGTATGCAGCAAAGAACAAGGATTTATAGGTTCGTATTATGAAGCCACAATTATTTCATGTCTTGATAATGGAAGATATGTGATTCGCTACAAGAATCTTCTTAAAGATGATGAGTCGTCTGAACTTCTCACCGAAACACTTCTTCCGAAGGATTTTCGTCCATCGCCGCCACGTGTTCGTAATCCTTCTAAATTCCAATTCAATCAAAAAGTGGATGTTTTTGATAACGATGGTTGGTGGGTAGGGGAAATCAAAAGTGAGAAGATCCTAATGGAAAAGAGTTGTTCCTATATTGTGTATTTTGACTATACTGATCAAAGCATTCAATACCCTTATGATCAAATTAGGGTTCATCATGATTTGATGTTTAGTGGAGAGTGGATGATGGAAGCTTAA 447 0.3669 MRPPMKKIDYKVGDKVEVCSKEQGFIGSYYEATIISCLDNGRYVIRYKNLLKDDESSELLTETLLPKDFRPSPPRVRNPSKFQFNQKVDVFDNDGWWVGEIKSEKILMEKSCSYIVYFDYTDQSIQYPYDQIRVHHDLMFSGEWMMEA 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04635 148 Pfam Agenet domain 13 74 IPR008395 -
Trre9g04635 148 CDD Tudor_Agenet_AtDUF_rpt2_4 85 134 - -
Trre9g04635 148 Gene3D - 4 67 - -
Trre9g04635 148 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 138 - -
Trre9g04635 148 SMART agenet_At_2 80 140 IPR014002 -
Trre9g04635 148 SMART agenet_At_2 8 77 IPR014002 -
Trre9g04635 148 CDD Tudor_Agenet_AtDUF_rpt1_3 10 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04635 Trre-Chr9 53429883 53430329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04635 20 99 PHD Transcription Factor Family AT5G58610 33.333 1.24e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04635 - - tpra:123923978 199.904