Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g04580 | ATGGAGTTTATGTTCCCTTGCCCCCTAGGTCATTTAACTAGAAGTTTAGTTACTGCTGGAATATCTATTGGAGGAATATACATGGTTCAGTTATCATCAATTTGTATATATGTTATATACTTCAGAAAGAAGAATGTAGATAAGTCTAAATTGACACCAGAAGATTTAATGGCACCTTCAACTAAAGATGACATATCTGATAAAGATTCCAATGCAAATACTGGATCAAAATTTATTGTGGTGGACAAATCATCGGAATTTTCGTACGAAGAACTAGCCATGGCTACAGATAACTTCAGTTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGAGAGGTCTACTATGGAAAATTGAGAGGCAAGAAAGCTGCAATAAAAAAGATGACGATGCTATCTACAAGAGAATTTCTTTCTGAAATGAAAGTCTTAACAAGTGTTCACCACTGCAATCTGGTACGTTTGATTGGTTATTGTATTGAGGGGTCTCTATTCCTTGCGTATGAATACATGGACAATGGAAACTTAAGCCAACATCTGCATAATTCAGAGAAAGAACCTTTGACATGGTCTACCAGGTTGCAAATTGCTCTGGATGTAGCAAGAGGACTCGAGTATATTCATGATCATTCCGTGCCTGTATATATCCATCGCGACATAAAATCAGATAATATTTTATTAAATGAAAACTTCAATGGGAAGATTGCAGATTTTGGAATGACCAAACTGTCTGATGTTGCAAGTTCAACAGATAACACTGATCATGTCGCTGGCACATTTGGTTACATGCCGCCTGAAAATGCATATGGCCATATTTCTCGCAAGATAGATGTATATGCTTTTGGAGTTGTTCTGTACGAACTAATTTCTGCTAAAGCAGCTGTGGTCGAAATTGATAAACGAAGTACCGAGTTCAAGAGCCTTGAGATTAAGACCAATGATTCTATTGATGAATACAAGAGCCTTGTAGCTTTGTTTGATGAAGTTATTGAACAAGAGGTAGATCCTATGGAAGGTCTAAGAAAGATGGTGGATCCAAGGCTAGGAGATAACTATTCAATTGATTCCATTAACAAGATGGCACAGCTGGCAAAGGCTTGCATAAACCGAAATCCGAAACAACGTCCAAGAATGGGAGATGTTGTAGTTTCTCTAATGAAACTAAATTTTACAATTGATGATGGAAGTAGGAGAGATGGTGCAGCATATTGA | 1209 | 0.3722 | MEFMFPCPLGHLTRSLVTAGISIGGIYMVQLSSICIYVIYFRKKNVDKSKLTPEDLMAPSTKDDISDKDSNANTGSKFIVVDKSSEFSYEELAMATDNFSLANKIGQGGFGEVYYGKLRGKKAAIKKMTMLSTREFLSEMKVLTSVHHCNLVRLIGYCIEGSLFLAYEYMDNGNLSQHLHNSEKEPLTWSTRLQIALDVARGLEYIHDHSVPVYIHRDIKSDNILLNENFNGKIADFGMTKLSDVASSTDNTDHVAGTFGYMPPENAYGHISRKIDVYAFGVVLYELISAKAAVVEIDKRSTEFKSLEIKTNDSIDEYKSLVALFDEVIEQEVDPMEGLRKMVDPRLGDNYSIDSINKMAQLAKACINRNPKQRPRMGDVVVSLMKLNFTIDDGSRRDGAAY | 402 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g04580 | 402 | ProSiteProfiles | Protein kinase domain profile. | 99 | 390 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g04580 | 402 | Pfam | Protein tyrosine and serine/threonine kinase | 101 | 382 | IPR001245 | GO:0004672|GO:0006468 | |
Trre9g04580 | 402 | ProSitePatterns | Protein kinases ATP-binding region signature. | 105 | 127 | IPR017441 | GO:0005524 | |
Trre9g04580 | 402 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 214 | 226 | IPR008271 | GO:0004672|GO:0006468 | |
Trre9g04580 | 402 | FunFam | PTI1-like tyrosine-protein kinase 3 | 170 | 397 | - | - | |
Trre9g04580 | 402 | SMART | serkin_6 | 99 | 390 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g04580 | 402 | SUPERFAMILY | Protein kinase-like (PK-like) | 73 | 385 | IPR011009 | - | |
Trre9g04580 | 402 | FunFam | LysM receptor kinase 2 | 78 | 169 | - | - | |
Trre9g04580 | 402 | Gene3D | Transferase(Phosphotransferase) domain 1 | 170 | 396 | - | - | |
Trre9g04580 | 402 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 14 | 392 | IPR044812 | GO:0019199|GO:0045087 | |
Trre9g04580 | 402 | Gene3D | Phosphorylase Kinase; domain 1 | 69 | 169 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g04580 | Trre-Chr9 | 53053430 | 53055787 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre9g04580 | 17 | 387 | Receptor kinase-like Gene Family | AT3G21630 | 54.474 | 8.39e-134 | 395 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Trre9g04580 | PK_Tyr_Ser-Thr | 7.1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g04580 | - | K13429 | tpra:123920651 | 555.444 |