Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04578 ATGCCCTTTTCCCCTCAGTACTTGGTGGGACTTGTGCCATACCTGGAGCTTTCAGGTTGTGGAAAAACAGTCATTAGTCAGGCTCTATCTAAGGTTCTAATGGACTTTCCACAACTCACAATGACATTACCTTATGGGCGTCAAGAATCTGTCATGAAGCGCACAACACTTGCGGCTAACACTCCGAACATGCCAATGGCTGCTCGTGAAGCTTCAATTTATACAAACCTCTTAATTCTTTCTTTCTCATACATTTTCGCTTCACCTTTCGATAGGAGAAATAAGAAGATCCATTGGAGAAATTGA 306 0.4248 MPFSPQYLVGLVPYLELSGCGKTVISQALSKVLMDFPQLTMTLPYGRQESVMKRTTLAANTPNMPMAAREASIYTNLLILSFSYIFASPFDRRNKKIHWRN 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04578 101 Gene3D - 19 77 IPR027417 -
Trre9g04578 101 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 31 77 IPR022878 GO:0046034|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04578 Trre-Chr9 53044590 53045131 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04578 19 82 Primary Pumps ATPases(2) AT1G78900 62.353 3.16e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04578 K02145 - bvg:104906090 97.8265