Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04567 ATGAAGCTCAAAAATAGGTTCATATTGTTGATTCTGTTTCTGCATTGTGTTATTTTTAAAGTGGAATCAAAATGTGTAAAAGGGTGTGATGTAGCTTTAGCTTCATACTATATTATGCCTTTAGTTCAACTCTCAAATATAACAACCTTTATGCAATCAAAGATTGTTAAAAATTCTCCTGAGGTTATAATGAGCTATAATAAAGACATAGTATTTAGTAATGATAATCTTTTTACATATTTTAGAATCAACATTCCATTCCCATGTGAATGTATTGGAGGCGAATTTCTCGGTCATGTGTTTGAATATTCTGCTTCTGAAGGAGATACTTATGATTTGATTGCAAATACTTATTATGCAAGTTTGACAACTGTTGAGGTTTTGAAAAAGTTCAATAGTTATGATCCAAATCATATACCAGTTAAGGCTAAGGTTAATGTTACTGTCAATTGTTCTTGTGGGAATAGTCAGATTTCAAAAGATTATGGCTTGTTTATAACCTATCCACTAAGGGCTAGTGATACTCTTGAGAAGATTGCAAGTGATTCTAAACTTGATGAAGGGGTGATACAAAGTTTTAATTCTGGTGTCAATTTTAGCAAAGGGAGTGGGATAGTGTTCATTCCAGGAAGAGATCAAAATGGAGATTATGTTCCCTTGTATCCTAGAACAGGTTTGACTTTCAGAATTGATATTATGATGATTAATTTCAGCTTGATCCATGTTCACAGAAAAGTTATATGCATATATGTCAAATACTTCCAAAAGAAGGAAGAAGAGAAAGTTAAACTTCCACAAACTTCTATTGCACTTTCAACTCAAGATGCCTCTGGTAGTGGAGAATATGAAACATCGGGATCCAGTGTGCCTGGTACTGGTAGTACTGCTGGTCTTACAGGCATTATGGTCGCAAAGTCAACGGAATTTTCGTATCAAGAACTAGCTAAGGCAACAAATAACTTCAGCTTGGATCATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAACTTAGAGGCGAGAAAACAGCGATTAAGAAGATGGACGTACAAGCGTCGACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTACATCACTTGAATCTGGTGAGGTTGATTGGATATTGCGTCGAGGGATCACTTTTCCTTGTATACGAACATATCGACAATGGAAACTTGGGTGAATATTTGCATGGTATAGGTAGAGAACCATTACCATGGTCTAGTAGAGTGCAAATTGCTCTAGATTCAGCAAGAGGTCTCGAATACATTCATGAACACACAGTTCCTGTGTATATCCATCGTGATGTAAAATCCGCAAATATATTGATAGACAAAAACTTACGCGGAAAGGTCGCGGATTTTGGCTTGACAAAACTTATTGAAGTTGGAAACTCCACACTTCACACTCGTCTTGTTGGAACTTTTGGTTACATGCCACCAGAATATGCGCAATATGGTGATGTATCTCCAAAAATAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAATGCTATTCTAAAAACAGGTGAATCAGTTGCTGAATCAAAGGGTCTTGTAGTCTTGTTTGAAGAAGCACTTAATCAAATTGATCCTTTGGAAGGTATTCGCAAATTGGTGGATTCGAGACTCAAAGATAACTATCCAATGGATTCCGTTCTAAAGATGGTTGAACTTGCAAGAGGATGTACTAGAGACAATCCACTACTACGTCCAAGTATGAGATCTATAGTTGTTGCTCTTATGACACTTTCATCACCAACTGAAGATTGTTATTATGACACTTCCTATGAAAATCAATCTCTCATAAATATATTATCAGTGAGATGA 1860 0.3586 MKLKNRFILLILFLHCVIFKVESKCVKGCDVALASYYIMPLVQLSNITTFMQSKIVKNSPEVIMSYNKDIVFSNDNLFTYFRINIPFPCECIGGEFLGHVFEYSASEGDTYDLIANTYYASLTTVEVLKKFNSYDPNHIPVKAKVNVTVNCSCGNSQISKDYGLFITYPLRASDTLEKIASDSKLDEGVIQSFNSGVNFSKGSGIVFIPGRDQNGDYVPLYPRTGLTFRIDIMMINFSLIHVHRKVICIYVKYFQKKEEEKVKLPQTSIALSTQDASGSGEYETSGSSVPGTGSTAGLTGIMVAKSTEFSYQELAKATNNFSLDHKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGEYLHGIGREPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAILKTGESVAESKGLVVLFEEALNQIDPLEGIRKLVDSRLKDNYPMDSVLKMVELARGCTRDNPLLRPSMRSIVVALMTLSSPTEDCYYDTSYENQSLINILSVR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04567 619 FunFam LysM receptor kinase 2 300 391 - -
Trre9g04567 619 ProSiteProfiles Protein kinase domain profile. 321 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04567 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Trre9g04567 619 FunFam PTI1-like tyrosine-protein kinase 3 392 605 - -
Trre9g04567 619 Pfam Protein tyrosine and serine/threonine kinase 322 590 IPR001245 GO:0004672|GO:0006468
Trre9g04567 619 SMART serkin_6 321 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04567 619 Gene3D Phosphorylase Kinase; domain 1 301 391 - -
Trre9g04567 619 Gene3D Transferase(Phosphotransferase) domain 1 392 613 - -
Trre9g04567 619 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 602 IPR044812 GO:0019199|GO:0045087
Trre9g04567 619 SUPERFAMILY Protein kinase-like (PK-like) 302 591 IPR011009 -
Trre9g04567 619 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04567 Trre-Chr9 52982334 52986343 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04567 1 619 Receptor kinase-like Gene Family AT3G21630 53.968 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre9g04567 PK_Tyr_Ser-Thr 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04567 - K13429 tpra:123921801 991.875