Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04565 ATGAAGCTCAAAAATAGGTTCATATTGTTGATTCTGTTTCTGCATTGTGTTATTTTTAAAGTGGAATCAAAATGTGTAAAAGGGTGTGATGTAGCTTTAGCTTCATACTATATTATGCCTTTAGTTCAACTCTCAAATATAACAACCTTTATGCAATCAAAGATTGTTAAAAATTCTCCTGAGGTTATAATGAGCTATAATAAAGACATAGTATTTAGTAATGATAATCTTTTTACATATTTTAGAATCAACATTCCATTCCCATGTGAATGTATTGGAGGCGAATTTCTCGGTCATGTGTTTGAATATTCTGCTTCTGAAGGAGATACTTATGATTTGATTGCAAATACTTATTATGCAAGTTTGACAACTGTTGAGGTTTTGAAAAAGTTCAATAGTTATGATCCAAATCATATACCAGTTAAGGCTAAGGTTAATGTTACTGTCAATTGTTCTTGTGGGAATAGTCAGATTTCAAAAGATTATGGCTTGTTTATAACCTATCCACTAAGGGCTAGTGATACTCTTGAGAAGATTGCAAGTGATTCTAAACTTGATGAAGGGGTGATACAAAGTTTTAATTCTGGTGTCAATTTTAGCAAAGGGAGTGGGATAGTGTTCATTCCAGGAAGAGATCAAAATGGAGATTATGTTCCCTTGTATCCTAGCTTTCTAACATTCATTTTTCCCTTTTGCAGAACAGGTCTTGCTAAGGGTGCAGCTATAGGTATAACTATAGCAGGAATATTTGGACTTCTATTAATAGTTATATGCATATATGTCAAATACTTCCAAAAGAAGGAAGAAGAGAAAGTTAAACTTCCACAAACTTCTATTGCACTTTCAACTCAAGATGGTAATGCCTCTGGTAGTGGAGAATATGAAACATCGGGATCCAGTGTGCCTGGTACTGGTAGTACTGCTGGTCTTACAGGCATTATGGTCGCAAAGTCAACGGAATTTTCGTATCAAGAACTAGCTAAGGCAACAAATAACTTCAGCTTGGATCATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCAGAACTTAGAGGCGAGAAAACAGCGATTAAGAAGATGGACGTACAAGCGTCGACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTACATCACTTGAATCTGGTGAGGTTGATTGGATATTGCGTCGAGGGATCACTTTTCCTTGTATACGAACATATCGACAATGGAAACTTGGGTGAATATTTGCATGGTATAGGTAGAGAACCATTACCATGGTCTAGTAGAGTGCAAATTGCTCTAGATTCAGCAAGAGGTCTCGAATACATTCATGAACACACAGTTCCTGTGTATATCCATCGTGATGTAAAATCCGCAAATATATTGATAGACAAAAACTTACGCGGAAAGGTCGCGGATTTTGGCTTGACAAAACTTATTGAAGTTGGAAACTCCACACTTCACACTCGTCTTGTTGGAACTTTTGGTTACATGCCACCAGAATATGCGCAATATGGTGATGTATCTCCAAAAATAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAATGCTATTCTAAAAACAGGTGAATCAGTTGCTGAATCAAAGGGTCTTGTAGTCTTGTTTGAAGAAGCACTTAATCAAATTGATCCTTTGGAAGGTATTCGCAAATTGGTGGATTCGAGACTCAAAGATAACTATCCAATGGATTCCGTTCTAAAGATGGTTGAACTTGCAAGAGGATGTACTAGAGACAATCCACTACTACGTCCAAGTATGAGATCTATAGTTGTTGCTCTTATGACACTTTCATCACCAACTGAAGATTGTTATTATGACACTTCCTATGAAAATCAATCTCTCATAAATATATTATCAGTGAGATGA 1896 0.3602 MKLKNRFILLILFLHCVIFKVESKCVKGCDVALASYYIMPLVQLSNITTFMQSKIVKNSPEVIMSYNKDIVFSNDNLFTYFRINIPFPCECIGGEFLGHVFEYSASEGDTYDLIANTYYASLTTVEVLKKFNSYDPNHIPVKAKVNVTVNCSCGNSQISKDYGLFITYPLRASDTLEKIASDSKLDEGVIQSFNSGVNFSKGSGIVFIPGRDQNGDYVPLYPSFLTFIFPFCRTGLAKGAAIGITIAGIFGLLLIVICIYVKYFQKKEEEKVKLPQTSIALSTQDGNASGSGEYETSGSSVPGTGSTAGLTGIMVAKSTEFSYQELAKATNNFSLDHKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGEYLHGIGREPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAILKTGESVAESKGLVVLFEEALNQIDPLEGIRKLVDSRLKDNYPMDSVLKMVELARGCTRDNPLLRPSMRSIVVALMTLSSPTEDCYYDTSYENQSLINILSVR 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04565 631 FunFam PTI1-like tyrosine-protein kinase 3 404 617 - -
Trre9g04565 631 Gene3D Phosphorylase Kinase; domain 1 313 403 - -
Trre9g04565 631 FunFam LysM receptor kinase 2 312 403 - -
Trre9g04565 631 MobiDBLite consensus disorder prediction 283 305 - -
Trre9g04565 631 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Trre9g04565 631 SMART serkin_6 333 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04565 631 Pfam Protein tyrosine and serine/threonine kinase 334 602 IPR001245 GO:0004672|GO:0006468
Trre9g04565 631 SUPERFAMILY Protein kinase-like (PK-like) 314 603 IPR011009 -
Trre9g04565 631 Gene3D Transferase(Phosphotransferase) domain 1 404 625 - -
Trre9g04565 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Trre9g04565 631 ProSiteProfiles Protein kinase domain profile. 333 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04565 631 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 614 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04565 Trre-Chr9 52982334 52986343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04565 1 631 Receptor kinase-like Gene Family AT3G21630 54.488 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre9g04565 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04565 - K13429 tpra:123921801 1014.22