Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g04557 | ATGAAATCCAAAGTTGTTTCAAAACCTCAAGATATTATTACCTACAACAGAAACAAATTCTCCAACAGGGTTAATGTTCCCTTCCCTTGTGAATGCATGAATGGAGAGTTTCTTGCTCACAATTTTCTGTACAGGCCAAGACATTATGATACCTATAATTCGATTGCTAATGTGGATTTTAGTAATTTGACCACTGATGAGTGGATGATGAGAGTCAACAATTATTCTCCAATGGATATTCCTGATTTTGCAACTCTTAATGTTATTGTTAACTGTTCTTGTGGGGACAGAGAGGTTTCTAAGGATTATGGTTTGTTCATCACATATCCACTTAGAAGTGAGGACACTTTGGATTCTATTGCAAAGGATACTAAGATTGAGTCTGAGTTGCTGCAGAGGTACAACCCTGGTGTGAATTTCAGCCAAGGGCATGGTCTTGTTTTTATTCCAAGGAAAGATGAAAATGGAGTTTATGTTCCCTTGCCCTCTAGAAACGCAGGTCATTTAGCTAGAAGTTTAGTTACTGCTGGAATATCTATTGGAGGAATATGCATGGTTCTGTTATTATCAATTTGTATATATGTTCGATACTTTCGAAAGAAGAATGGAGAGGAGTCTAATTTGCCTATGGCACATTCAACTAAAGATGTTGATAAAGATACCAATGGTAATACGGGATCCAAATTCATTTTGGTGGACAAATCACCGGAATTTTCGTACGAAGAACTTGCCAATGCAACAGATAACTTCAGTTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGCGAGGTCTACTATGGTGAGCTAAAAGGCCAGAAAATTGCCATCAAGAAGATGAAGATGCAAGCAACAAGAGAATTTCTTTCTGAACTGAAAGTCTTAACAAGTGTTCATCACTGGAACCTGGTACACTTGATTGGATATTGTGTTGAGGGATATCTATTCCTTGTCTATGAATACATGGAAAATGGAAACTTAAGCCAGAATCTACATAATACAGCGAAAGAACCGATGACATGGTCTACCAGGTTGCAAATTGCTCTAGATGTAGCAAGAGGCCTCGAGTATATTCATGATCATTCAGTGCGTGTATATATCCACCGCGACATAAAATCAGAAAATATTTTATTAAATGAAAACTTAACTGGCAAGATTGCTGATTTCGGATTAACCAAGCTGACTGATATTGCAAGTTCGACTGATAACACTGATCATGTGGCAGGCACATTTGGTTATATGCCGCCCGAAAATGCATATGGACGTATTTCTCGTAAGATAGATGTATATGCTTTTGGAGTTGTTCTTTACGAACTAATTTCTGCCAAAGCAGCTGTGATCAAGATCGATAAAACCAAGTTAGATTCCAAGAGCCTTGAGATTAAGACCGATGAATCTATTGATGAATACAAAAGCCTTGTAGCTTTGTTTGATGAAGTTATTGACGAAGAAGGAAATCCTATAGAACAAGGACTACGAAAACTGGTCGATCCAAGGCTAGGAGATAACTATTCGATTGATTCGATAATAAAGCTTGCCAAGACTTGCACGAACCGAGATCCGAAACAACGTCCAAGAATGAGAGCTGTTGTGCTTTCTCTTATGAAACTAAATTCTACAATTGATGATGGAAGTATGATAGTTAGTGAAGCATTGAGTCCCACTATGGAGGCAGCATGA | 1677 | 0.3798 | MKSKVVSKPQDIITYNRNKFSNRVNVPFPCECMNGEFLAHNFLYRPRHYDTYNSIANVDFSNLTTDEWMMRVNNYSPMDIPDFATLNVIVNCSCGDREVSKDYGLFITYPLRSEDTLDSIAKDTKIESELLQRYNPGVNFSQGHGLVFIPRKDENGVYVPLPSRNAGHLARSLVTAGISIGGICMVLLLSICIYVRYFRKKNGEESNLPMAHSTKDVDKDTNGNTGSKFILVDKSPEFSYEELANATDNFSLANKIGQGGFGEVYYGELKGQKIAIKKMKMQATREFLSELKVLTSVHHWNLVHLIGYCVEGYLFLVYEYMENGNLSQNLHNTAKEPMTWSTRLQIALDVARGLEYIHDHSVRVYIHRDIKSENILLNENLTGKIADFGLTKLTDIASSTDNTDHVAGTFGYMPPENAYGRISRKIDVYAFGVVLYELISAKAAVIKIDKTKLDSKSLEIKTDESIDEYKSLVALFDEVIDEEGNPIEQGLRKLVDPRLGDNYSIDSIIKLAKTCTNRDPKQRPRMRAVVLSLMKLNSTIDDGSMIVSEALSPTMEAA | 558 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g04557 | 558 | SMART | serkin_6 | 250 | 534 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g04557 | 558 | SUPERFAMILY | Protein kinase-like (PK-like) | 225 | 533 | IPR011009 | - | |
Trre9g04557 | 558 | Pfam | Protein tyrosine and serine/threonine kinase | 252 | 446 | IPR001245 | GO:0004672|GO:0006468 | |
Trre9g04557 | 558 | FunFam | PTI1-like tyrosine-protein kinase 3 | 321 | 545 | - | - | |
Trre9g04557 | 558 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 365 | 377 | IPR008271 | GO:0004672|GO:0006468 | |
Trre9g04557 | 558 | Gene3D | Phosphorylase Kinase; domain 1 | 221 | 320 | - | - | |
Trre9g04557 | 558 | FunFam | LysM receptor kinase 2 | 229 | 320 | - | - | |
Trre9g04557 | 558 | Gene3D | Transferase(Phosphotransferase) domain 1 | 321 | 549 | - | - | |
Trre9g04557 | 558 | ProSitePatterns | Protein kinases ATP-binding region signature. | 256 | 278 | IPR017441 | GO:0005524 | |
Trre9g04557 | 558 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 6 | 543 | IPR044812 | GO:0019199|GO:0045087 | |
Trre9g04557 | 558 | ProSiteProfiles | Protein kinase domain profile. | 250 | 540 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g04557 | Trre-Chr9 | 52938244 | 52941315 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre9g04557 | 12 | 539 | Receptor kinase-like Gene Family | AT3G21630 | 51.455 | 0.0 | 556 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Trre9g04557 | PK_Tyr_Ser-Thr | 6e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g04557 | - | K13429 | tpra:123920651 | 728.783 |