Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g04554 | ATGCACGGGTCGGTGTCTAGTTTCCCTAAATCTAGGGTTTTCGCCACAATCTCCACCGGATCTCAACCTTCTATCCATGAAGCTTCTTTAGCTGATTATAAAGTTTCCAATGCATTCCTCTTCCCCGGCCAGGGTGCACAAGCTGTTGGAATGGGAAAAGAAGCTCAGAATGTTCCTTCTGCTGCTGTTTTGTACAAGAAGGCTAATGAGATATTAGGGTTTGATCTTCTTGATGTATGCATTAATGGGCCAAAGGAAAAGCTGAATTCAACAGTTATCAGTCAGATGGTAGATAAAGCAAACGAAAGAGCTTCCAAGAATCATAAATCAAAACGTTTCAAAAGCACAAATCCACATATGTCATCTCATGATGCAACTCCTCACATGACATCTGATGATGTACCTCCTCATATGACTCCTCATGATGAACTTCCTCCCATGGTACCTCTTCATAGGACATCTAATGCTACCCATCCTCTTAAGAAACCCCCTTCAAACATGTCTCGTGTTCCACCTCTTTTTAGGACATCTAATACTAAGACATCTAGTGCTACACCTCATACTACGACATCAGCTACTAGGACGTCTAATGGCCCACATACTCATGCTGCAACACATACTACGACATCAACTACTAGGACGTCTAATGGCCCACATACTCATGCTGCAACTCATACTACGACATCAGCTACTAGGAAGTCTAATGGCACACATAATCATCCTGCAAATCATACTACGACATCAGCTACTAGGAAGTCTAATGGCGCACATAATCATGCTGCAACTCATACTACATCTAATGTCCCACCTCCTCATGATGTTCCTCATGCTGCATCTCCTACTAGGACATCTAATGTCCCACTTCCTCATGATGTTCCTCATGCTGCATCTGCTACTAGGACATCTAATGTGACACATCCATCTTCAAGGGTAGCATCACCATCTAATTCACAACCTTATGATTCTGATGGAGCACAAACCCAAAGATTAAGTGAAAATGTCGTTCCATCTGAGGCACAAAGTCGTGGCAGGAAGCAAACTTTATTCCTTGACTTAGATGGATTTTTGCCTTCGTATGATGCAGCTAATGCGATTGGAGATATGATGAGGAGTAATTATACTGAGCCATGGATCTCATGGAAACAGATACCCACTGAGACAAGGGACTTGTGGTTTGGAGAATTGAAGAAAAAGTTTAAGTTTTGTCCACCGGATGATGCGTGGGCTAGAAACAACTTTGAAACACGAGGTGCAGCAATAATGAAAAATAACTTATGCAAGGCTCGTCTCACAAAGAAAAGACCAAGTTGGATTGATTCGGATGTGTGGAATGCATTAGATGAGAAATGGAAAAATCCAGAATATAAAAAGAAGTGCATGCAGGCGAAAACAAATAGAGCATCTGACCGTGATGGTTTTGGAAAGCCCCTTCACACTTGTGGCTCTATCACCACATCACAACATAGAGCTAATTTGACGGAAGAGAATGGCACTCCCCCCGCTCCTTCAGATTTGTTTCTTCACACACACCAACATCGCAAGAATAAGACTTGGGTTGATCGAAAATCAGAACATGTCTATGGAAAGTATAAACATAGATGGGAAGAATTAACTCAACAAGCATCTTTAGAAGGAACTCAGCCACCAAATGACATAGATGTGTGGACTGAGGTTGCAGGAATAAGGAAAGGACATATATATGGTCTTGGGAGTGAATCGTCTTCATTTGTAGGCCGGCGAAATTATCGTGGTTCAAGCTCCGTTTCAACTGAATGGGTGCAAAGACATGAATTTGAAGAACTGAAACTTGAAAGGGAAGAAATGAGAATTGAAAGGGAAGAAATGAGAAAGGAAAGGGACGAACTACGTGGTATGGTAAAACAATTGATGAAAAAATTTAACTTTCGGCCCAAGTCATATACTAGAGATCAAGTTCATGAAGATGATGTGGTTGATGATAATGATGATATGGTTGATGATAATGAGGATGTGGCTAATGATAATGATGATATGGTTGATGATAATGAGGATGTGGCTAATGATAATGATGATATGTCTGATGATGATAATGTCGTGTTTGATGATGAAGACTTAGAGCAAGAATGGCAAATATATCAGATTTCAAAAGATTATGGCTTGTTTATTACCTATCCACTAAGGGCTAGTGATTCTCTTGAGAAGATTGCAAGTCATTCTAAACTTGATGAAGGGTTGATTAATAGTTTCAATTATGGTGTCAATTTTAGCAAAGGGAGTGGGATTGTGTTCATTCCAGGAAGAGATCAAAATGGAAGCTATATGCCCCTTCGCTCGAGCACAATAGGAGTTGTGGCTATTGTTGGAATATCTGTTGGAGTACTAGCAGGACTTTTATTATTGTCAATTTGTGTTTATATTAAATATTACCTAAAGAAAAAGGCATGGCAGAAGAAAAATTTGATCTTGGATGAACCAAACATGATCTCAGATCAAACCGGTACTCACATCACAGGCATTATAGTGGAAAACTCACTAGAGTTTTCATATGAAGAATTATGTGTTGCTACAAATAACTTCAGTGTCGATAACAAAATTGGTGAAGGTGGTTTTGGAGAAGTCTTCTATGCCGAGCTGCGAGGACAGATAGCCGCTGTCAAGAAAATGAAGATGAAAGCATCCAAAGAATTTTATGCTGAATTGAAAATCTTATCTCGTGTTCATCACTTGAACCTGGTAGGGTTGATTGGATATTGTGTTGAAGGTTGTCTCTTCCTTGTCTATGAATACATTGACAATGGAAACTTAAGTCAAAATCTTCGCGATTTAGAAAGAGAACCTTTGCCATGGTCTACAAGGATGCAAATCGCTCTTGATTCAGCCCGAGGTCTTGAATATATTCACGAGCATACCGTGCGTGTGTATATCCATCGTGACATAAAGTCAGAAAATATTTTATTAGACAGAAACTTTCGTGCAAAGGTTGCAGATTTTGGATTATCCAAGCTTGCTGAAGTTGAAAATTCAACTTCATCGGCTATAGTTGCAGAGGGTACATTCGGCTACATGCCACCCGAATATGCGCATGGTGTTATCGCTCTTTCTCCTAAAATAGATGTCTATGCATTTGGAGTTGTTCTATATGAACTAATTTCTGCTAATCCAGCTGTAATCAATGATGGTCCTGAAGTAAAAGGCCTTGTAGCTATGTTTGGTGAAGTGCTTGATCAAGAACCGAATCCGACAGAAGGTCTAAAAAATCTGGTGGATCCTAGACTTGGAGATAACTACTCAATTGATTCAGTTTACAATATAGCAAAACTAGCCAAAGCATGTACAATGAAGGATCCACAATTACGTCCAAGCATGAGATCCGTCGTCGTTGCTCTTATGACACTAACTTCTACCACTGAGGATTGGAATGTTTCATCTTTTTTTGAAAATCCAGCTTTTGTAAATTTAATGTCTGGAAAATAG | 3453 | 0.3976 | MHGSVSSFPKSRVFATISTGSQPSIHEASLADYKVSNAFLFPGQGAQAVGMGKEAQNVPSAAVLYKKANEILGFDLLDVCINGPKEKLNSTVISQMVDKANERASKNHKSKRFKSTNPHMSSHDATPHMTSDDVPPHMTPHDELPPMVPLHRTSNATHPLKKPPSNMSRVPPLFRTSNTKTSSATPHTTTSATRTSNGPHTHAATHTTTSTTRTSNGPHTHAATHTTTSATRKSNGTHNHPANHTTTSATRKSNGAHNHAATHTTSNVPPPHDVPHAASPTRTSNVPLPHDVPHAASATRTSNVTHPSSRVASPSNSQPYDSDGAQTQRLSENVVPSEAQSRGRKQTLFLDLDGFLPSYDAANAIGDMMRSNYTEPWISWKQIPTETRDLWFGELKKKFKFCPPDDAWARNNFETRGAAIMKNNLCKARLTKKRPSWIDSDVWNALDEKWKNPEYKKKCMQAKTNRASDRDGFGKPLHTCGSITTSQHRANLTEENGTPPAPSDLFLHTHQHRKNKTWVDRKSEHVYGKYKHRWEELTQQASLEGTQPPNDIDVWTEVAGIRKGHIYGLGSESSSFVGRRNYRGSSSVSTEWVQRHEFEELKLEREEMRIEREEMRKERDELRGMVKQLMKKFNFRPKSYTRDQVHEDDVVDDNDDMVDDNEDVANDNDDMVDDNEDVANDNDDMSDDDNVVFDDEDLEQEWQIYQISKDYGLFITYPLRASDSLEKIASHSKLDEGLINSFNYGVNFSKGSGIVFIPGRDQNGSYMPLRSSTIGVVAIVGISVGVLAGLLLLSICVYIKYYLKKKAWQKKNLILDEPNMISDQTGTHITGIIVENSLEFSYEELCVATNNFSVDNKIGEGGFGEVFYAELRGQIAAVKKMKMKASKEFYAELKILSRVHHLNLVGLIGYCVEGCLFLVYEYIDNGNLSQNLRDLEREPLPWSTRMQIALDSARGLEYIHEHTVRVYIHRDIKSENILLDRNFRAKVADFGLSKLAEVENSTSSAIVAEGTFGYMPPEYAHGVIALSPKIDVYAFGVVLYELISANPAVINDGPEVKGLVAMFGEVLDQEPNPTEGLKNLVDPRLGDNYSIDSVYNIAKLAKACTMKDPQLRPSMRSVVVALMTLTSTTEDWNVSSFFENPAFVNLMSGK | 1150 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g04554 | 1150 | Pfam | Plant transposase (Ptta/En/Spm family) | 439 | 572 | IPR004252 | - | |
Trre9g04554 | 1150 | Coils | Coil | 868 | 888 | - | - | |
Trre9g04554 | 1150 | FunFam | PTI1-like tyrosine-protein kinase 3 | 923 | 1136 | - | - | |
Trre9g04554 | 1150 | FunFam | LysM receptor kinase 2 | 831 | 922 | - | - | |
Trre9g04554 | 1150 | SUPERFAMILY | FabD/lysophospholipase-like | 38 | 95 | IPR016035 | - | |
Trre9g04554 | 1150 | Gene3D | - | 35 | 103 | IPR001227 | GO:0016740 | |
Trre9g04554 | 1150 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 967 | 979 | IPR008271 | GO:0004672|GO:0006468 | |
Trre9g04554 | 1150 | MobiDBLite | consensus disorder prediction | 649 | 688 | - | - | |
Trre9g04554 | 1150 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 706 | 1135 | IPR044812 | GO:0019199|GO:0045087 | |
Trre9g04554 | 1150 | Pfam | Protein tyrosine and serine/threonine kinase | 854 | 1120 | IPR001245 | GO:0004672|GO:0006468 | |
Trre9g04554 | 1150 | Coils | Coil | 596 | 632 | - | - | |
Trre9g04554 | 1150 | Gene3D | Phosphorylase Kinase; domain 1 | 824 | 922 | - | - | |
Trre9g04554 | 1150 | Gene3D | Transferase(Phosphotransferase) domain 1 | 923 | 1139 | - | - | |
Trre9g04554 | 1150 | ProSitePatterns | Protein kinases ATP-binding region signature. | 858 | 880 | IPR017441 | GO:0005524 | |
Trre9g04554 | 1150 | MobiDBLite | consensus disorder prediction | 170 | 269 | - | - | |
Trre9g04554 | 1150 | SUPERFAMILY | Protein kinase-like (PK-like) | 829 | 1122 | IPR011009 | - | |
Trre9g04554 | 1150 | MobiDBLite | consensus disorder prediction | 101 | 342 | - | - | |
Trre9g04554 | 1150 | ProSiteProfiles | Protein kinase domain profile. | 852 | 1138 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g04554 | 1150 | SMART | serkin_6 | 852 | 1124 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre9g04554 | 1150 | MobiDBLite | consensus disorder prediction | 296 | 342 | - | - | |
Trre9g04554 | 1150 | MobiDBLite | consensus disorder prediction | 644 | 688 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g04554 | Trre-Chr9 | 52911750 | 52923046 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre9g04554 | 707 | 1150 | Receptor kinase-like Gene Family | AT3G21630 | 54.526 | 7.52e-159 | 484 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Trre9g04554 | PK_Tyr_Ser-Thr | 3.5e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g04554 | - | K13429 | tpra:123913621 | 539.65 |