Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04536 ATGGCATCATCATATCCAAATCCAACCTTAACAACACTAATAATCATCCTCACAACAATTTCTTTTCTTCTCTTCATCCCAAAAACAAATTCTCAACAAGAATATGTAAACAACAGACAACTAGATTGTGAAAACACATACAATTCAACTTTAGGCAACATTTGCAACAGCATAAACTCATGTCAATCATATCTCACATTCAAATCAACACCTAATTACAACACACCTTCTTCCATTTCAAATCTCCTCAACACAACACCTTCCCTCATCTCTCAATCCAACAACATCTCCACCTTTCAATCAATCCCAACAGACACAATCACAACCGTCCCAATTAACTGTTCTTGTTCAGGTGAAGATGTTTCTTCCATTGCTGATATTTTTGGTGCTGATGTACAAAGTGTTTATGAAGCAAATAATCTTTCTTCAACTTCCATTATTTACTATTTCACACCACTTTTAATCCCTCTCAAAAATGAACCACCGAAAAATATTGTAAGACAAGCTTCACCGCCGGAATCTCCGCCGGTGGAGACACCGGAATCCGGTGGTTCATCCTCTTCTAAGAAATGGGTCATCGTCGGTGTCGCGGTTGGAGTTGTTGTTCTGCTTCTGGTGGGTCTTGCTCTGTTTTTGCTCTGTTTCCGGCGGCGACGACAATCGGAACAAACACCGTCGACGGTTAAGAAATTTTCAGATTCTGATACTAAGAAGATTTCAGATTTTAATTCCACAACAACTACTCAATCTTGGTCTCTTTCTTCCGAGGGGATTCGATATGCGGTTGATTCGTTGACTAAGTATAAATATGAAGAATTGCAAAATGCTACAAATTTTTTCAGTGAAGAGAATAAGATCAAAGGTTCTGTTTATAGAGCTTCTTTTAAAGGTGATGATGCTGCTGTTAAGATTCTTAAAGGTGATGTTTCTTCTGAGATAAACATTTTGAAGAGAATTAATCATGCTAATATTATAAGATTATCTGGTTTTTGTGTCTACAAAGGTAACACTTATCTTGTTTATGAGTTTTCTGAGAATAAATCTCTTGATGATTGGCTTCACATTGAGAAAGTGAAATCTAATTCAATGTTTTTGAGTTGGTTTCATAGAGTTCAAATTGCTCATGATGTTGCTGATGCACTTAATTATCTTCATAATTATGCTAATCCACCACATGTTCATAAGAATTTGAAAAGTGGTAATATTCTTTTAGATAGAAATTTTAGAGGTAAAGTTTCAAATTTTGGTTTAGCTAGAGTTATGGAGAATGAAGGTGAAGAAGGTTTTCAATTAACAAGACATGTAATAGGAACACAAGGTTATATGGCACCTGAGTATATCGAAAACGGTTTGATTACTCCTAAAATGGATGTTTTTGCATTTGGTGTTGTGATTCTTGAGCTTCTTTCTGGTAGAGAAGTTGTTAATGATGATAAGAATAATGGTTTAGGGGATCAACTTTTGTCTTCAACTATTAATCAAGTTTTTGAAGAGGAAAATGTTAAGGAAAAGCTTAGAGGTTTTATGGATCCAAATTTGAGAGATGAATATCCTTTGGAACTTGCTTATTCAATGGCTGAGATTGCTAAAAGATGTGTTGCTAAAGATCTTAATTTAAGACCAAATGTTTCTGAGGTTTTTATGGTTTTGTCTAAGATTCATTCTTCTACATTGGATTGGGATCCTTCTGAGGAACTTGAACGGTCTAGATCTGGTAGTCATGTTTCTGATAGCAAATATTTTAGTGCTAATATATAA 1758 0.3498 MASSYPNPTLTTLIIILTTISFLLFIPKTNSQQEYVNNRQLDCENTYNSTLGNICNSINSCQSYLTFKSTPNYNTPSSISNLLNTTPSLISQSNNISTFQSIPTDTITTVPINCSCSGEDVSSIADIFGADVQSVYEANNLSSTSIIYYFTPLLIPLKNEPPKNIVRQASPPESPPVETPESGGSSSSKKWVIVGVAVGVVVLLLVGLALFLLCFRRRRQSEQTPSTVKKFSDSDTKKISDFNSTTTTQSWSLSSEGIRYAVDSLTKYKYEELQNATNFFSEENKIKGSVYRASFKGDDAAVKILKGDVSSEINILKRINHANIIRLSGFCVYKGNTYLVYEFSENKSLDDWLHIEKVKSNSMFLSWFHRVQIAHDVADALNYLHNYANPPHVHKNLKSGNILLDRNFRGKVSNFGLARVMENEGEEGFQLTRHVIGTQGYMAPEYIENGLITPKMDVFAFGVVILELLSGREVVNDDKNNGLGDQLLSSTINQVFEEENVKEKLRGFMDPNLRDEYPLELAYSMAEIAKRCVAKDLNLRPNVSEVFMVLSKIHSSTLDWDPSEELERSRSGSHVSDSKYFSANI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04536 585 Gene3D Transferase(Phosphotransferase) domain 1 345 569 - -
Trre9g04536 585 MobiDBLite consensus disorder prediction 561 585 - -
Trre9g04536 585 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 119 - -
Trre9g04536 585 SUPERFAMILY Protein kinase-like (PK-like) 246 547 IPR011009 -
Trre9g04536 585 MobiDBLite consensus disorder prediction 164 187 - -
Trre9g04536 585 Gene3D Phosphorylase Kinase; domain 1 228 343 - -
Trre9g04536 585 Pfam Protein kinase domain 307 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04536 585 Gene3D LysM domain 116 167 IPR036779 -
Trre9g04536 585 FunFam PTI1-like tyrosine-protein kinase 3 344 564 - -
Trre9g04536 585 ProSiteProfiles Protein kinase domain profile. 200 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04536 Trre-Chr9 52735542 52737554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04536 110 571 Receptor kinase-like Gene Family AT2G33580 51.098 4.35e-154 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre9g04536 Pkinase 5.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04536 - - tpra:123921078 838.95