Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04530 ATGTCATCTTCTATCACCAAACTTTTTCTATCATCATTCATTCTTTGTAGTTTCTTGCAAGAACACACTCATGCCATTAGAAAGACATATATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCTTCTCTTGATGATCTTGAATCAGCCACAAATTCACATTATGATTTACTTGCTTCAATCTTAGGAAGCCATGAGAAGGCAAAGGAAACAGTTATGTATTCTTACAATAAGCACATAAATGGATTTGCTGCATTACTTGAAGATGAAGAGGCAACAAAGATTGCAAAGAACTCAAATGTAGTTTCTGTTTTCTTGAGCAAAGAATATAAATTGCATACTACTAGGTCATGGGAATTTCTTGGACTGGAAAAATATGGTGGAATTTCTCTTGATTCTGCTTGGTGGATGGCCAGATTTGGTGAAGATACAATCATGGCTAATTTAGATTCAGGTGTTTGGCCAGAACATGAAAGTTTCAGTGACATTGGATATGGTCCAGTTCCATCAAAGTGGCTTGGGAATGGAGTATGTCAGATTGATCATTTTATTACTACTTCAAATACAACAACATTCTGCAATAGGAAGCTAATTGGAGCAAGAATATTCAGTAAAAACTACGAAGCACAGTTTGGAAAACTCCACCCTTCAAACCTCACAGCGCGTGACTTCGTTGGTCACGGCACCCACACATTATCAACAGCTGCGGGTAACTTTTCACCTAATGTAACAATATTTGGTAACGGTAATGGCACAGCAAAAGGTGGGTCCCCTAGAGCGCGAGTGGCATCCTACAAAGTGTGTTGGTCTAAAACCGATGCAGGTGGATGTCACGAAGCTGATATTCTAGAAGCATTTGATCATGCTATATATGATGGTGTTGATGTGATTTCAATCTCTTTGGGTGGTTCTGATCCATATATTGAAGCTTTGTTCACTGATGGAATTTCAATTGGATCATTTCATGCTGTTGCTAAGAATGTTGTAGTTGTTTGTTCTGCTGGAAATGATGGACCAGCTCCTAGAACTGTAACAAATGTAGCACCTTGGTCTTTCACAGTTGCAGCTAGTACAATTGATAGGGAATTTGTTAGTCACGTTTTTATTGGTAACAAACATTATATGAAGGGTGCTAGTCTTAGTAAAGGCTTACCAACAGGTCCATCGAAGAAAAAGAAAATATATCCGATGATTCATTCTATCGATGCTAGATTTCCTAATGCCACAATTGAAGATGCCCGTTATTGCAAGCCTGGAACACTTGATCCTACCAAAGTAAAGGGAAAGATCTTAGTTTGCATTCGACTTGACCAAATAACATCGATTGCTCAAGGCTTTGAAGCTGCTATTGCAGGTGCAGTAGGAGTTTTTGTGATGAATGATAAGAAAAGTGGAAATGTACTTCTAGCTGAGCCTCATCCTTTACCCGGTGCAAGTATGGATTGCAATGAAGATGAAGATATTGATGAACGTGAATGGTTAGGAAAAGGTGGTAGTGAAAATAACATAACTAGGAAAATGGTTGCATACATGGATGCTGCAAGAACATATACAGGATTAAAGCCAGCTCCAATTGTGGCTGGATTTTCGTCTAGGGGACCTAGTGCAGTGCAACCATTGATTCTTAAGCCTGACATAACAGCTCCTGGAGTGAACATATTGGCTGCTTATTCACTAGCCACTAGTCCTTCCAATCTACCATCAGATACGCGTCGAGTTCCTTACAATCTTCAACAAGGAACTTCTATGTCTTGTCCTCATGTTGCTGGCATTGCTGGTCTTCTCAAGACACTTCATCCTAATTGGAGTCCAGCAGCTATCAAATCAGCCATCATGACTACCGCTACTACACTAGATAACACCAATCAACCAATTCGGAATGCATTCGATAAGATATCAACTCCATTTGAATATGGTTCTGGACATATTCAACCTAACCTTGCGATGGATCCAGGACTTGTTTATGATCTAACCACAACTGATTACTTGAACTTCATATGTGCTTCTGGTCACAATCAAAACTTACTCAAGTTCTTCAATAACAACTCTTACACTTGTCCCGAGTCTTACAATATCGAAAATCTCAACTATCCTTCAATTACCGTAACTAATCGAGGATTGAACACTATAAATGTTACTCGTACCGTAACAAATGTTGGGTCTCCTAGCACATATATTGTTGAAACTCGCCAACTTGAAGAATTTAAGGTTCATGTTCAACCAAGTTCCTTGACATTTAAGAAAATTGGAGAAAAGAAAACCTTTCACGTAATTATGGAGGCAATTGGTTGGCCTCCACATGGTTTTCCGGTATTTGGGAAATTGACATGGACAAATGGAAAACATAGAGTAACTAGTCCTATTGTAGTTCTTTAA 2379 0.3892 MSSSITKLFLSSFILCSFLQEHTHAIRKTYIVYLGGHSHGPNPSLDDLESATNSHYDLLASILGSHEKAKETVMYSYNKHINGFAALLEDEEATKIAKNSNVVSVFLSKEYKLHTTRSWEFLGLEKYGGISLDSAWWMARFGEDTIMANLDSGVWPEHESFSDIGYGPVPSKWLGNGVCQIDHFITTSNTTTFCNRKLIGARIFSKNYEAQFGKLHPSNLTARDFVGHGTHTLSTAAGNFSPNVTIFGNGNGTAKGGSPRARVASYKVCWSKTDAGGCHEADILEAFDHAIYDGVDVISISLGGSDPYIEALFTDGISIGSFHAVAKNVVVVCSAGNDGPAPRTVTNVAPWSFTVAASTIDREFVSHVFIGNKHYMKGASLSKGLPTGPSKKKKIYPMIHSIDARFPNATIEDARYCKPGTLDPTKVKGKILVCIRLDQITSIAQGFEAAIAGAVGVFVMNDKKSGNVLLAEPHPLPGASMDCNEDEDIDEREWLGKGGSENNITRKMVAYMDAARTYTGLKPAPIVAGFSSRGPSAVQPLILKPDITAPGVNILAAYSLATSPSNLPSDTRRVPYNLQQGTSMSCPHVAGIAGLLKTLHPNWSPAAIKSAIMTTATTLDNTNQPIRNAFDKISTPFEYGSGHIQPNLAMDPGLVYDLTTTDYLNFICASGHNQNLLKFFNNNSYTCPESYNIENLNYPSITVTNRGLNTINVTRTVTNVGSPSTYIVETRQLEEFKVHVQPSSLTFKKIGEKKTFHVIMEAIGWPPHGFPVFGKLTWTNGKHRVTSPIVVL 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04530 792 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 114 IPR037045 -
Trre9g04530 792 Gene3D - 667 792 - -
Trre9g04530 792 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Trre9g04530 792 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Trre9g04530 792 PRINTS Subtilisin serine protease family (S8) signature 580 596 IPR015500 -
Trre9g04530 792 Gene3D Peptidase S8/S53 domain 144 663 IPR036852 GO:0004252|GO:0006508
Trre9g04530 792 Pfam Subtilase family 142 621 IPR000209 GO:0006508|GO:0008236
Trre9g04530 792 FunFam Subtilisin-like protease SBT5.3 18 114 - -
Trre9g04530 792 ProSitePatterns Serine proteases, subtilase family, serine active site. 581 591 IPR023828 -
Trre9g04530 792 Gene3D - 361 519 - -
Trre9g04530 792 CDD PA_subtilisin_like 370 482 - -
Trre9g04530 792 FunFam Subtilisin-like protease SBT1.5 144 373 - -
Trre9g04530 792 ProSiteProfiles Serine proteases, subtilase domain profile. 118 650 - -
Trre9g04530 792 CDD Peptidases_S8_3 111 617 IPR034197 -
Trre9g04530 792 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 791 IPR045051 -
Trre9g04530 792 Pfam Fibronectin type-III domain 695 791 IPR041469 -
Trre9g04530 792 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Trre9g04530 792 SUPERFAMILY Subtilisin-like 113 654 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04530 Trre-Chr9 52658560 52663907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04530 29 791 Subtilisin-like Serine Gene Family AT2G04160 52.480 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04530 - - gmx:100794135 1243.02