Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04507 ATGGTTCGAGCGAGGACTACTCCACACCCGAGGTCACCATTAGTTTTGCCAAAACTAACAGTACGAAAACCGATTTCCCCTCAGCAAAACAACATTTGCACTGAACAGAGTCAAGCGAAGGAAATCCACTATCGCGGTGTTCGAAAGCGACCACGAGGTCGATACGCTGCAGAAATCCGAGACCCGTTTAAAAGAAAACGTCTATGGTTAGGAACTTATAAAACTGCTGCTGAAGCTGTCCGTGCTTATGATCAGAAAGCGATTGTATTTCGTGGAGAAATGGCTAAAACTAATTTCCCAATCTCTGAATACATATTTAATGATGGTCAGATTCCTCCTGCTGCTCCTCCTGTTCAGATTCCTCAATCTACTGCTCCTCTGGCGAACGATTGTGAGACGAGTGAATGTCATTCCTCATGTTGCTAA 426 0.446 MVRARTTPHPRSPLVLPKLTVRKPISPQQNNICTEQSQAKEIHYRGVRKRPRGRYAAEIRDPFKRKRLWLGTYKTAAEAVRAYDQKAIVFRGEMAKTNFPISEYIFNDGQIPPAAPPVQIPQSTAPLANDCETSECHSSCC 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04507 141 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 121 - -
Trre9g04507 141 FunFam Ethylene-responsive transcription factor 2 43 102 - -
Trre9g04507 141 ProSiteProfiles AP2/ERF domain profile. 43 100 IPR001471 GO:0003700|GO:0006355
Trre9g04507 141 SUPERFAMILY DNA-binding domain 43 102 IPR016177 GO:0003677
Trre9g04507 141 Pfam AP2 domain 43 89 IPR001471 GO:0003700|GO:0006355
Trre9g04507 141 PRINTS Ethylene responsive element binding protein signature 66 82 IPR001471 GO:0003700|GO:0006355
Trre9g04507 141 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Trre9g04507 141 CDD AP2 43 102 IPR001471 GO:0003700|GO:0006355
Trre9g04507 141 Gene3D AP2/ERF domain 42 102 IPR036955 GO:0003700|GO:0006355
Trre9g04507 141 SMART rav1_2 43 106 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04507 Trre-Chr9 52444354 52444779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04507 38 104 AP2-EREBP Transcription Factor Family AT1G03800 64.179 4.64e-27 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Trre9g04507 AP2 1.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04507 K09286 - tpra:123904184 109.383