Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04492 ATGAGGCTACTTACATGCATATTCATAGCATTATTAATAATGATAACACAAATTATCATGGTGTCTTGCAAAATTAGAAAGCATGTACCAGCAGTAATTGTGTTTGGTGATTCCTCTGTTGATTCTGGAAACAACAATAAGATAGCAACACTACTCAAGAGCAACTTTAAACCTTATGGCCGCGACTTCGAAGGTGGCCGCCCCACCGGACGGTTTTGTAATGGCCGTGTTCCACCGGACTTCATCGCGGAGGCTTTTGGTGTTAAGAAAAATATACCGGCATATTTGGATCCTGCTTATACCATTGATGATTTTGTCACTGGTGTTTGTTTTGCTTCTGCTGGAACTGGATATGATAATGCAACTTCTGATGTACTAAATGTAATACCATTATGGAAGGAGATAGAGTACTTCAAGGAGTATCAAGAAAAATTGAGAGCTCATGTTGGTAAAGAGAAGGCAAATTATATAATAAGTGAAGCATTATACCTAATAAGCTTAGGAACCAATGATTTCTTAGAAAACTACTATATTTTCCCAACAAGACAATTTCATTTCACCGAATCACAATATCAAGATTTTCTAGTGGATATTGCAGAGAATTTTGTTAGGAAAATATATTCACTTGGTGCTAGGAAATTATCCATAACTGGCCTTATTCCTATGGGGTGTCTCCCATTAGAGAGGGCAACAAATTTTTTAGATGACCATGGTTGCAATGAAAAATACAACAATGTGGCTTTGGAATTTAATGCCAAATTGGAGAATATGATATCAAAGGTAAATAATGAGCTCCCACAATTGAAGGCTTTGTCGGCAAATGCTTATGATATTGTCAATGATATCATTGCACGACCTTCCTTCTATGGTTTTGAGGAGGCAGAGAAGGCATGTTGTTCCACAGGAACATTTGAGATGAGCTACTTATGTAGTGATAAGAATCCATTTACATGCAAAGATGCAAATAAATATGTGTTTTGGGATGCCTTTCATCCTACTGAGAAGACAAATCGGATAGCTTCAAACTATTTAATCCCTAAACTTTTTGCTGCTTTTAGATGA 1062 0.3672 MRLLTCIFIALLIMITQIIMVSCKIRKHVPAVIVFGDSSVDSGNNNKIATLLKSNFKPYGRDFEGGRPTGRFCNGRVPPDFIAEAFGVKKNIPAYLDPAYTIDDFVTGVCFASAGTGYDNATSDVLNVIPLWKEIEYFKEYQEKLRAHVGKEKANYIISEALYLISLGTNDFLENYYIFPTRQFHFTESQYQDFLVDIAENFVRKIYSLGARKLSITGLIPMGCLPLERATNFLDDHGCNEKYNNVALEFNAKLENMISKVNNELPQLKALSANAYDIVNDIIARPSFYGFEEAEKACCSTGTFEMSYLCSDKNPFTCKDANKYVFWDAFHPTEKTNRIASNYLIPKLFAAFR 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04492 353 Pfam GDSL-like Lipase/Acylhydrolase 32 344 IPR001087 GO:0016788
Trre9g04492 353 CDD SGNH_plant_lipase_like 30 347 IPR035669 -
Trre9g04492 353 PANTHER GDSL ESTERASE/LIPASE EXL3 14 344 - -
Trre9g04492 353 SUPERFAMILY SGNH hydrolase 32 348 - -
Trre9g04492 353 Coils Coil 251 271 - -
Trre9g04492 353 Gene3D SGNH hydrolase 20 349 IPR036514 -
Trre9g04492 353 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Trre9g04492 353 FunFam GDSL esterase/lipase APG 21 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04492 Trre-Chr9 52344155 52348466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04492 11 345 Pollen Coat Proteome AT1G75910 36.471 3.49e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04492 - - gmx:100805486 586.26