Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04488 ATGAGGCTTATATTCATATTCATAGCATTGCTAAAATTGATAACACAAATTAGTATGGTGGCTTGCAAGACTAGAAACCATGTACCAGCAGTAATTGTGTTTGGTGATTCTTCTGTTGATTCTGGAAACAACAATAAGATAGCAACACTTCTCAAGAGCAACTTTAAACCTTATGGTCGCGACTTCGAAGGTGGCCGCCCCACTGGACGGTTTTGTAATGGCCGTGTTCCACCGGACTTCATCGCGGAGGCTTTCGGTGTTAAGAAAAATATACCGGCGTATTTGGATCCTGCTTATACCATTGATGATTTTGTCACTGGTGTTTGCTTTGCTTCTGCAGGAACTGGATATGATAATGCAACTTCTAATGTACTAAACGTTATACCACTGTGGAAGGAGGTAGAGTACTTCAAGGAGTATCAAGAAAAATTGAGAGCTCATGTTGGTAAAGAGAAGGCAAATTATATAATAAGTGAAGCATTATACCTAATAAGCTTAGGAACCAATGATTTCTTAGAAAACTACTATGTCTTCCCAACAAGACAATTTCATTTCACCGAATCACAATATCAAGATTTTCTTGTGGATATTGCAGAGAATTTTGTTAGGAAAATATATTCACTTGGTGCTAGGAAATTATCCATAACTGGCCTTATTCCTATGGGGTGTCTCCCATTAGAGAGGGCAACAAATATTTTAGGTGACCATGATTGCAATGAAAAATACAACAATGTTGCTAAGCAATTTAATGTCAAATTGGAAAATATGGTATCAAAGATAAATAAGGAGCTCCCACAATTGAAGGCTTTGTCAGCAAATCCTTATCATATTTTCAATGATATCATTACAAGACCTTCCTTCTATGGATTTGAGGAGGCAGAGAAGGCATGTTGTTCAACAGGAACATTTGAGATGAGCTACTTATGTAGTGATAAGAATCCATTTACATGCAAAGATGCAAATAAATATGTGTTTTGGGATGCATTTCATCCTACTGAAAAGACAAACCGCATAGCTTCAAATCATTTAATCCCTAGACTTCTAGCAGCATTTAGATGA 1059 0.3692 MRLIFIFIALLKLITQISMVACKTRNHVPAVIVFGDSSVDSGNNNKIATLLKSNFKPYGRDFEGGRPTGRFCNGRVPPDFIAEAFGVKKNIPAYLDPAYTIDDFVTGVCFASAGTGYDNATSNVLNVIPLWKEVEYFKEYQEKLRAHVGKEKANYIISEALYLISLGTNDFLENYYVFPTRQFHFTESQYQDFLVDIAENFVRKIYSLGARKLSITGLIPMGCLPLERATNILGDHDCNEKYNNVAKQFNVKLENMVSKINKELPQLKALSANPYHIFNDIITRPSFYGFEEAEKACCSTGTFEMSYLCSDKNPFTCKDANKYVFWDAFHPTEKTNRIASNHLIPRLLAAFR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04488 352 PANTHER GDSL ESTERASE/LIPASE EXL3 11 343 - -
Trre9g04488 352 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Trre9g04488 352 Gene3D SGNH hydrolase 17 349 IPR036514 -
Trre9g04488 352 FunFam GDSL esterase/lipase APG 20 347 - -
Trre9g04488 352 Pfam GDSL-like Lipase/Acylhydrolase 31 342 IPR001087 GO:0016788
Trre9g04488 352 SUPERFAMILY SGNH hydrolase 31 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04488 Trre-Chr9 52321430 52325443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04488 29 344 Pollen Coat Proteome AT1G75910 38.941 2.83e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04488 - - gmx:100805486 585.104