Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04482 ATGGGTTTCACTGTTGGGTTGGTAAGAAATGTCTTCTCAAGAAATCATGCTATTAGGTCTCATGAAAGAAAAATAATGAGACGAAATTCTTCGGAAAATAGAAGATGGATATCTGTTAAATCATATTTGTGTGGGAATGAATTCAATTCAGTTCTTGCTGAGGAAGATTCAGCTTCAATTAAGAGCTCTGAAGTAACAGTTACACAATCCATACAAGAAGATTTGTTGAGTGATAAAGGTGAAACCAAGAGTGAAGAAACTGTTGAGAATGTAATAGAAAAAAGTACTAATTCAAATTCCAAATCATTGAATGAAGAAGAAGCTGCTATTATTATTCAATCAGCATATAGAAGTTTCAAGTTGAGGTGTAAAAATGAAGAAATCATAAGGTCAGAAAATGATGAAGAGAAGCTGAATTTAGTAACAGAAAGTCCAGATAGAAAATCTATGGCTACATCAGTTGAAGTCCAAACAGGAAATTCCATTGAAATATTTTCACTTGAAGGAGAAAAATTGAGCATTTACAATAGAATTCAGAACAGGAACAGAACAAGAGCAATAAAGCAAAAGGAAGATTGGGATGATAGCACTGTGAGTAGCAATGTTTCAAAAATGAGGATGCAGAATAGAATGGAGGCATCAACAAGGAGAGAAAGAGCATTGGCTTATGCCTTCTCACAACAGTTAAGAATATGTTCAAAGAGAAAATTAGCAAAACATGAGAACAACATGGAACAAAATATGAGCTGGAGTTGGCTTGAAAGATGGATGGCAACTAGACATCAAGACACTTCATCAGTTGAAAGCCATGCTATGAATCACTATGAAAATTTCAACACTGATGATCATCACAAATTCACTATAAAGACAAGATTTTTAGATGTTTCTGGTGGTGAAGAAAAGGAAAGTTGTGGATCAAATGAAGTGCCACTTCATTTTGATAATTATTCAATAAATTCACAAGATGAAAAAGTTAGCAGCTTCAAATTGCCAACAACTAAAAAGACTAATTTTAAAGCTAGGAGAACTGTGTCTAGAAGGAAAACTGTTCCAAGTTATCAATTCCATGATGAGAATCCTAAGGTGAGCATTAAAGATGGTTCAAGCAATGGTGTTAAGGATATTAAGCAAAAACCAAAGCAAGATGGAAGCAAGACAGATATAAGTCAAATGACAATTAGCACCCCCAAAACTTCTAATGAGTAA 1206 0.3391 MGFTVGLVRNVFSRNHAIRSHERKIMRRNSSENRRWISVKSYLCGNEFNSVLAEEDSASIKSSEVTVTQSIQEDLLSDKGETKSEETVENVIEKSTNSNSKSLNEEEAAIIIQSAYRSFKLRCKNEEIIRSENDEEKLNLVTESPDRKSMATSVEVQTGNSIEIFSLEGEKLSIYNRIQNRNRTRAIKQKEDWDDSTVSSNVSKMRMQNRMEASTRRERALAYAFSQQLRICSKRKLAKHENNMEQNMSWSWLERWMATRHQDTSSVESHAMNHYENFNTDDHHKFTIKTRFLDVSGGEEKESCGSNEVPLHFDNYSINSQDEKVSSFKLPTTKKTNFKARRTVSRRKTVPSYQFHDENPKVSIKDGSSNGVKDIKQKPKQDGSKTDISQMTISTPKTSNE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04482 401 MobiDBLite consensus disorder prediction 384 401 - -
Trre9g04482 401 PANTHER IQ-DOMAIN 5-RELATED 177 368 - -
Trre9g04482 401 Pfam IQ calmodulin-binding motif 107 124 IPR000048 GO:0005515
Trre9g04482 401 ProSiteProfiles IQ motif profile. 105 134 IPR000048 GO:0005515
Trre9g04482 401 MobiDBLite consensus disorder prediction 340 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04482 Trre-Chr9 52299858 52303882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04482 1 354 IQD Protein Family AT5G35670 39.216 8.14e-76 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04482 - - tpra:123924719 759.214