Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04442 ATGATTGGTTTTTCCCTTTTGGTTCTTGTATTAATTGGGAATACAAATGCTACACTTTCAAAAGATTATTACTATAATTCTTGTCCAAAACTCTATGAAACTGTGAAGTGCACAGTTGAATCTGCCATAGCAAAAGAAACCCGCATGGGTGCTTCTCTTCTGCGTTTGTTCTTCCATGATTGTTTTGTTAATGGATGTGACGGTTCAGTTTTGCTCGACGACACATCAAGTTTCACTGGAGAAAAAACTGCAATTCCCAACAACAATTCTGCGCGTGGATTTGAGGTGATCGACAAAATCAAGGCAGCGGTGGAGGAAGTGTGCCCAGGTGTAGTCTCATGTGCTGATATCCTTGCCGTTACCGCTAGAGATTCCGTTGAGATACTTGGTGGCCCAACTTGGGATGTAAAACTTGGAAGAAGAGATGCTAGAACCGCCAGTAAATCAGCTGCAAACAAAGACATCCCAGCACCCAGTTCAACCCTCAACCAACTCATCAAAAGATATAATGCCCTTGGTCTTTCCACCAAGGATTTGGTCGCATTGTCTGGTGGTCACACAATTGGACAAGCAAGATGCACTCTCTATAGAGATCACATATACAATGACACCGATATAGATACCTCCTTTGCTCGGACAAGGCAATCAGGGTGCCCAAAGACATCAGGGTCAGGAGACAATAACTTGGCACCCCTTGATCTCGCAACACCGACATCCTTCGATAACCATTACTTCAAGAACCTTGTTGATAGTAAGGGACTACTCCACTCCGACCAAGTACTCTTCAATGGTGGTTCCGCTGATTCCATAGTGCATGAATATAGCACAAATCCAAGTTCTTTTTTCTCTGATTTTGTCACTGCCATGATTAAGATGGGAGACATTAGTCCTCTCACCGGCTCAAATGGAGAGATAAGAAAGAATTGCAGGCGTGCGAACTAA 942 0.4352 MIGFSLLVLVLIGNTNATLSKDYYYNSCPKLYETVKCTVESAIAKETRMGASLLRLFFHDCFVNGCDGSVLLDDTSSFTGEKTAIPNNNSARGFEVIDKIKAAVEEVCPGVVSCADILAVTARDSVEILGGPTWDVKLGRRDARTASKSAANKDIPAPSSTLNQLIKRYNALGLSTKDLVALSGGHTIGQARCTLYRDHIYNDTDIDTSFARTRQSGCPKTSGSGDNNLAPLDLATPTSFDNHYFKNLVDSKGLLHSDQVLFNGGSADSIVHEYSTNPSSFFSDFVTAMIKMGDISPLTGSNGEIRKNCRRAN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04442 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Trre9g04442 313 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PANTHER PEROXIDASE 72-RELATED 16 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 FunFam Peroxidase 22 164 - -
Trre9g04442 313 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 Gene3D - 22 310 - -
Trre9g04442 313 Pfam Peroxidase 36 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 CDD secretory_peroxidase 19 311 IPR033905 GO:0004601|GO:0042744
Trre9g04442 313 FunFam Peroxidase 156 292 - -
Trre9g04442 313 Gene3D Peroxidase, domain 2 156 292 - -
Trre9g04442 313 SUPERFAMILY Heme-dependent peroxidases 19 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 ProSiteProfiles Plant heme peroxidase family profile. 18 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre9g04442 313 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04442 Trre-Chr9 52041507 52043248 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04442 17 313 Peroxidase AT5G05340 70.707 6.53e-161 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04442 K00430 - gmx:100791414 506.523