Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04437 ATGTCGCCGGTGACCGGAGCAAACTTACCTCTCTTACCAGGATCAAAGGTATCTTCCGAACCGGCAGCAACGGTTTCCGGTGCGGTGTTTAATGTCGCGACGAGTATAATTGGCGCCGGAATAATGTCACTTCCGGCGACTTTGAAGGTTCTCGGAGTGATTCCGGCGTTTGTTTTGATTTTGGTGATTGCTTTATTGGCGGAAATATCGGTGGAGTATTTGATGAGGTTTACACATTCAGGTGAAACGACGACGTATGCTGGTGTTATGAGAGAAGCTTTTGGACCTTTAGGAGCTGTTGCAACTCAACTTTGTGTTGTGATTACTAATCTTGGGTGTTTAATTATGTACTTAATTATTATTGCTGATGTACTTTCTGGAAATAAACCTGAAGGAGAAGTACATTTGGGTCTTTTGCAACAATGGTTTGGAATTCATTGGTGGAATTCAAGGGAATTTGCTTTGCTGATCACTTTAATCTTCATTTTGCTTCCATTGGTATTGTACCGTCGTGTAGAGTCGTTGAAGTTTAGTTCTGCAGTATCAACTCTACTTGCTATTGCATTTGTTACAATATGTTCTGTGTTGGCAATTATTGCTCTTGTGGAAGGAAAAACACAAACACCTAGATTGGTTCCTCGTTTGGACCATGAAACAACTTTCTTTGATCTTTTCACTGCAGTTCCAGTTATCGTCACAGCCTACACATTTCATTTTAATGTACATCCAATTGGATTTGAGCTAGGAAAACCATCAGACATGACAACAGCAGTGAGAATAGCACTAATTCTATGTGCAATCATATACTTCTCAATAGGTCTATTTGGTTACTTATTATTTGGTGATTCAACTCAATCGGACATTCTCATAAATTTTGACCACAATGCTGATTCATCATTTGGTTCATTACTCAATACTTTGGTCCGTTTAAGCTATGCTTTTCATGTCATGCTAGCATTTCCTCTCCTCAATTTCTCATTGAGAACAAACATTGATGAATTCTTATTCCCTAAAAGACCTTTATTAGCTACAGATAATAAGAGATTTGTGGTTATTACTTTGGTGCTTTTGGTTTTTAGTTACATTGCTGCTGTTGCAATTCCGGATATTTGGTTCATTTTTCAGTTCATGGGATCAACTTCTGCTGTTTGTCTTGCTTTTGTGTTCCCTGGTTCTATTGTTTTAAGGGATATTCATGGTATATCAACAAGAAAGGACAAAATTATAGCACTGGTTATGGTTATACTGGCTGTAGTAACAAGTGTGATTGCTGTCTCCAACAACATATATAAACTTTTTTAG 1302 0.3802 MSPVTGANLPLLPGSKVSSEPAATVSGAVFNVATSIIGAGIMSLPATLKVLGVIPAFVLILVIALLAEISVEYLMRFTHSGETTTYAGVMREAFGPLGAVATQLCVVITNLGCLIMYLIIIADVLSGNKPEGEVHLGLLQQWFGIHWWNSREFALLITLIFILLPLVLYRRVESLKFSSAVSTLLAIAFVTICSVLAIIALVEGKTQTPRLVPRLDHETTFFDLFTAVPVIVTAYTFHFNVHPIGFELGKPSDMTTAVRIALILCAIIYFSIGLFGYLLFGDSTQSDILINFDHNADSSFGSLLNTLVRLSYAFHVMLAFPLLNFSLRTNIDEFLFPKRPLLATDNKRFVVITLVLLVFSYIAAVAIPDIWFIFQFMGSTSAVCLAFVFPGSIVLRDIHGISTRKDKIIALVMVILAVVTSVIAVSNNIYKLF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04437 433 PANTHER AMINO ACID TRANSPORTER 16 420 - -
Trre9g04437 433 Pfam Transmembrane amino acid transporter protein 24 425 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04437 Trre-Chr9 51996496 52000291 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04437 11 432 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.142 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04437 - - tpra:123881388 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g04437 9 51996496 52000291 Trre5g02160 5 16218722 16220998 PCT