Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04436 ATGCTTCCTCTAGTTATGTTACGCCGTGTAGATTCACTCAAGTATAGTTCTGCATTATCAATCGCGCTAGCATTGGTTTTTGTTGTAATATGTTCCTCAATGGCATTTAACGCATTATGGTCCGGAAAAACACAGTCAGTGAGAATATTTCCTGATTTCTCTCAAGTCACTGCCCTTGATCTTTTCACCACTGTCCCTGTTTTTGTCACAGGCTTCGGATTTCATGTTAATGTTCATCCCATTAGAGCAGAGCTTGTAAAACCATCAGACATGAGTATCGCTGTGCGAATTTCGTTATTAATCTCCGTTGCCATTTACTTTGCTATCGGATTCTTTGGATACCTATTATTTGGGGACTCAATCATGCCGGATGTGTTGATAAACTTTGACCAGAACTCCGATTCGAGTGTCGGTCGATTGCTAGATGACATTATTCGGCTAAGCTACGCACTCCATCTCGCACTTGTGTTCCCTATCATGTTCTATTCCTTGAGGGCCAACATCGATGAATTATTATTCTCAAATAAAAATAAACCTCCTTTGGCTTTGGACACCCGAAGATTTGTGTCACTCACTCTAGTTTTGCTAGCATTCACATATTTGGTGGCTGTGGAAATTCCAAATGTTTGGTACTTTTTTCAATTCTTGGGATCTACCACCATTGTTTGCATCTCATTCCTCTTCCCTGCTGCAATCATTCTAAGAGATATGCATGGTATATCAAAAACAAAAGATCAAGTAATGGCAATAGTGGTGATTATTTTGGCTGTTGGGACAAGTGGAATTGCTATATGGACCAACTTAAATGGTTCCAATGCTGATTAA 825 0.3976 MLPLVMLRRVDSLKYSSALSIALALVFVVICSSMAFNALWSGKTQSVRIFPDFSQVTALDLFTTVPVFVTGFGFHVNVHPIRAELVKPSDMSIAVRISLLISVAIYFAIGFFGYLLFGDSIMPDVLINFDQNSDSSVGRLLDDIIRLSYALHLALVFPIMFYSLRANIDELLFSNKNKPPLALDTRRFVSLTLVLLAFTYLVAVEIPNVWYFFQFLGSTTIVCISFLFPAAIILRDMHGISKTKDQVMAIVVIILAVGTSGIAIWTNLNGSNAD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04436 274 PANTHER AMINO ACID TRANSPORTER 1 258 - -
Trre9g04436 274 Pfam Transmembrane amino acid transporter protein 2 248 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04436 Trre-Chr9 51992612 51993986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04436 1 268 Amino Acid or Auxin Permease AAAP Family AT3G56200 54.647 3.41e-92 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04436 - - gmx:100794031 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g04436 9 51992612 51993986 Trre9g04436 9 51992612 51993986 ECH
Trre5g02160 5 16218722 16220998 Trre9g04436 9 51992612 51993986 PCT