Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04435 ATGTCTAATTCAATTTCCACTACCTCCGAAACTATTACCCCTCTTCTTCAACAAAACCCAATTCCACAAAATGGAACAATTTCAGGAGCAGTATTCAACATATCAACAACCATGGTGGGTGCTGGAATCATGTCGATTCCGGCAACCATGAAAGTTCTTGGAATAATTCCAGGTTTAATTGTGATCGTGTTGGTGGCAGTTATAACAGATTTAACTGTTGAGTTTATGTTGAGGTTTACAAGTTCTGGTAAAGCGGTTACTTATGCGGGTATGGTGGGTGAGTCTTTTGGTTCTGTTGGATCTCTTGCTGTTAAGATGGTGTTCTTATCGTTTATTTCATTATTCTTGGTGATGTCCTCTGTGGAAATGAGTTCAATGGTACCACACATTTAG 393 0.3919 MSNSISTTSETITPLLQQNPIPQNGTISGAVFNISTTMVGAGIMSIPATMKVLGIIPGLIVIVLVAVITDLTVEFMLRFTSSGKAVTYAGMVGESFGSVGSLAVKMVFLSFISLFLVMSSVEMSSMVPHI 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04435 130 Pfam Transmembrane amino acid transporter protein 25 119 IPR013057 -
Trre9g04435 130 PANTHER AMINO ACID TRANSPORTER 22 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04435 Trre-Chr9 51991342 51992534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04435 10 106 Amino Acid or Auxin Permease AAAP Family AT5G38820 46.154 4.29e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04435 - - gmx:100794031 123.635