Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04420 ATGACTTCTACAACAGGAAACTATACCATTGTGTGCCAAAATCCTCACAATTATGAACGTCATGATATCTGGCACTTTGACAACCCTCTTAATAACCCAAATTGTCTTTTCTTTCTTCAATGTTCTTTGATTGCCATTGTCTCTCAATGCATTGATCTTTGTCTCAAACCTCTTGGTCAATCATCCATTGTATCTCAAATTCTTGGTGGAGTACTATTTGGCCCATCATTTCTTGGTCACAAAAAGATAATGCTATCAAATTCATTGTTTCCTCCAAAAGGTGCAATGGTAATTGAAACATCAGCAGCATTTGGAGTAATGTTCTTCTTCTTCATAATAGGTGTAAAGATGGATCCAGCCACATTAATGAAAACTGAAAAAAAAGCCATAATCATAGGTCTTTCTGTATTCATATTCACATTTTCAATTCCAACTGGTTTATCTCTTTTTATGACTACTCATGTTTCCATGGACAAAAGTCTCTCAAATTCTCTTCCATTAATAGCTGGTTCACAATCCTTCACTGCTTTTGTTGTCATAGCAATCCTTCTCACTGAGCTCAAGATCCTAAACACTGATATCGGCCGATTAGCAATGTCGGCCGCAATGTTTAATGATATTGTAGGATTTACATTTACAGCGGTTCAATTTGCAGTAATGCAAAATAAAGGTGGATTAGCTATACCAGAAGGACCACCTATAGGAACCAGTTTGATAGCTAAAATGGAGACATTTTCTTTTGGTTTCTTTTATCCAACTTACCTAGCTATTACTGGATTGCAAACTAATCTCTTCAAAATTGATTATAAGTCAATGTGGATTGTGTCAACTATTGTGATTGTTTCTATTGTGGTGAAAATTGGAGCTGTTATGTTGCCTGGATATTACAATAATATACCTTTGAAAGAATGTTTTGTGATTGGACTTATTTTAAATGCAAGGGGCATTGCTGAACTTGTTGTTTATAATCTATGGAGGGGAACCAAGATATTATCAGATCAAGAGTTCTCTTTGGCAGTGTTTTCAATTATAGTGATAAATGCTATCATAACACCCCTTATAAAATTCATTTATGATCCTTCAAAACAATATAATGCAATAACAAGAAGTTCCATTCAACATAGCAAAGGAGACATGATGGATTTTCGGGTCATGGTTTGCATTCACAAGGATGAAAACATCCCAACAATGATGAACTTATTGGAAGCATCTCATGCTAGTGAAGATAGACATGTTAAAGTGATAACACTCATCCTAGTAGAGCTTCTAGGAAGATCAAGACCACTTCTCGTCGCGCATCAACAGCACGATATCCTACGGTCCACCGTATCAAAATCAATACAAATCAACAATGCATTTCAACAATATGCACAACAGAACAAAGGGTATGCATCAGTTGAATTATTTACTTCAATCTCAAATTTCGAAACCATGCATGATGATATTTGTCGTATAGCAGTCGACAGAATACCCAACATTTTGATTCTTCCTTTTCACAAACAATGGGCAATTGATGGTAGTGTTGAAATAACAAACAAAGCAATTCAATACTTGAACATTAAAGTTCTCAAAATGGCACCATGTTCTGTTGGAATCCTAATTGATAGAGGAACAATTAATACCACACAATTGTTTTCAAGACAAACATCAACATCAACATTAGCATACCATGTTGGTGTGTTCTTCATTGGAGGTGCAGATGATATAGAAGCATTAGCCTATAGTTCAAGAATGTGTAAACACAAAAATGTGGACGTAACGGTGGTTCGGTTTCTTCAATTCGGATTAGAAAATTCCATCGAGAGGAAGCGCGAGAGTAATATGATAGACGAATATAGAAACATAAATAAGGGAAACAATAGATTTAAGACTACTGATGAAGTTTTGAAAGATGGAATAGAAATATCTAAAAGTATTAGAAAATGGATAGATTCTTTTGATTTGGTTATGGTAGGGATGCAACATTCAGAATCTACTATGTTTGAAGGGTATGAGGAATGGAGTGAGTGTCCTGAGCTAGGAGTCATTGGTGACATGCTTGCTTCTCAGGATTTTTTGACAAAGGCATCAATTTTGGTTGTGCAACAACAAAGAATTATGCAAAGAAAGTTTGCTAAAAATAAAGTTGAAAGAGATCATGTATTATATTCTGCACCTATTGAGATGCAAATACGAATAGATGAAAAAGCACGAAGTAAATAA 2202 0.3501 MTSTTGNYTIVCQNPHNYERHDIWHFDNPLNNPNCLFFLQCSLIAIVSQCIDLCLKPLGQSSIVSQILGGVLFGPSFLGHKKIMLSNSLFPPKGAMVIETSAAFGVMFFFFIIGVKMDPATLMKTEKKAIIIGLSVFIFTFSIPTGLSLFMTTHVSMDKSLSNSLPLIAGSQSFTAFVVIAILLTELKILNTDIGRLAMSAAMFNDIVGFTFTAVQFAVMQNKGGLAIPEGPPIGTSLIAKMETFSFGFFYPTYLAITGLQTNLFKIDYKSMWIVSTIVIVSIVVKIGAVMLPGYYNNIPLKECFVIGLILNARGIAELVVYNLWRGTKILSDQEFSLAVFSIIVINAIITPLIKFIYDPSKQYNAITRSSIQHSKGDMMDFRVMVCIHKDENIPTMMNLLEASHASEDRHVKVITLILVELLGRSRPLLVAHQQHDILRSTVSKSIQINNAFQQYAQQNKGYASVELFTSISNFETMHDDICRIAVDRIPNILILPFHKQWAIDGSVEITNKAIQYLNIKVLKMAPCSVGILIDRGTINTTQLFSRQTSTSTLAYHVGVFFIGGADDIEALAYSSRMCKHKNVDVTVVRFLQFGLENSIERKRESNMIDEYRNINKGNNRFKTTDEVLKDGIEISKSIRKWIDSFDLVMVGMQHSESTMFEGYEEWSECPELGVIGDMLASQDFLTKASILVVQQQRIMQRKFAKNKVERDHVLYSAPIEMQIRIDEKARSK 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04420 733 Pfam Sodium/hydrogen exchanger family 225 353 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre9g04420 733 Pfam Sodium/hydrogen exchanger family 43 223 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre9g04420 733 Gene3D - 35 223 IPR038770 -
Trre9g04420 733 Gene3D - 224 366 IPR038770 -
Trre9g04420 733 PANTHER CATION/H + ANTIPORTER 225 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04420 Trre-Chr9 51873527 51877160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04420 225 698 Antiporter Super Family AT1G06970 37.630 5.23e-109 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04420 K26731 - gmx:100779700 739.954