Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04412 ATGGACACTTCTACTACAGAGAAGAACAACAACAACACTCACCAAATTTTGCAATTTGGAATGAAAAATGCAGCAAAAAGACACAATTGTTACACCAACCCACTTCATTTTTTCAGGTTATTTTTCATTTGCATCTTCTGGGTCAATTTTTTATGGCTTCCTATGAAACCAGTTTTGTGTGAAGAGCGTTGGGATGGAGTTGTTGTAACACAATCAAATTTCTTAGCACTTCAAGCTTTCAAAGAAGAGTTAATTGATCCAAAAGGGTACCTAAAAACATGGAATGATAGTGGCTTTGGAGCTTGTTCTGGTGCTTGGGCTGGAATTAAATGTGCTCAAGGACAAGTTATTGTAATTCAGCTTCCATGGAAAGGATTAAAGGGTAAAATCACTGAGAGAATTGGTCAACTTGAAGGTCTTAGAAAGCTAAGTCTTCATAATAATCAAATTAGTGGTTCAATCCCTTCATCATTAGGACTTTTAATCAATCTTAGAGGAGTTCAACTCTTCAATAATAGGTTAACAGGTTCAATCCCTCCTTCATTAGGTTATTGTCCTATGCTTCAATCTTTAGATTTTAGTAACAATTTGCTCACAGGTATAATCCCTGAGAGTCTTGGAAATGCCACTAAGCTTTATTGGCTTAACTTGAGTTTCAATTCATTGTCTGGTTCAATACCAACTAGTTTAACTAGCTTGAATTCTCTCACTTTCATATCTCTTCAACACAATAATCTTTCAGGTTCTATTCCTAACTCATGGGGTGGTAGCTTGAAAAATGGATTCTCTAGGCTTCAAAATCTTGTATTGGACCATAATTTCTTGACTGGAACAATTCCTGCTTCTTTAGGTAAATTAAGAGAACTTAGAGAGATTTCTGTTGGTCATAACCAATTTAGTGGTCACATTCCTCAAAGTATTGGAAACATTTCAAATCTTAAACAACTTGATTTTTCATCGAATAATCTCAGTGGAGAAATTCCCATTTCTTTTGATAATCTAGATAGTCTAAATTTCTTCAATGTTTCTCATAATAACCTTTCTGGTCCTGTTCCAACCTTACTAGCACAGAAGTTTAACTCGAGCTCATTTGTCGGAAATATTCAACTATGTGGTTATAGTCCTTCGACTCGATGTCCCTCTTTAGCTCCTTCTGAAGTACCTGCAGCACCTTCTGAAGCACCGAAACACCGCCATCACAAGAAACTAGGTACAAAAGACATAATCCTCATAGTAGCAGGAGTGCTCCTTGTAGTCCTGATAATAGTCTGCTGCATCCTTCTCTTCTGTCTATTCCGAAAAAGAAAAACATCGAATGTCGAGGGTGGACAGGCTACAGCGAGAGCAGCTGCTGCTGGCAGGACAGGAAAAGGAGTCCCTCCTATCAGTGGAGAAGTTGAAGCGGGCAGTGACGCTGGAGGCAAACTGGTCCATTTTGATGGACCATTGGCTTTTACAGCTGACGATCTCCTCTGTGCAACGGCCGAGATAATGGGAAAGAGCACATATGGAACAGTGTATAAGGCAACACTGGAGGATGGTAGTCAAGCTGCCGTGAAACGATTGAGGGAAAAAATCACAAAGAATCATAGAGATTTTGAATCTGAAGTTAATGTTCTAGGGAGAATTAGACATCCAAATCTTTTGGCATTGAGAGCCTATTACTTGGGACCTAAAGGAGAAAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAAGTCTTGCTTCTTTTCTACATGCTCATGGACCTGAAATACGAATTGATTGGCCAATAAGGATGAACATAGCACAGGGCATGGCTCGTGGCTTGTTATACCTACATTCACATGAGAACATTATACATGGGAACCTAACTTCAAGCAATGTATTGCTTGATGAGAACACAAATGCAAAAATAGCAGACTTTGGTCTATCAAGGTTGATGACAACTGCGGCTAACTCAAATGTGATTGCTACTGCCGGAGCATTAGGATACCGAGCTCCCGAGCTATCGAAGCTGAAGAAAGCAAACACAAAAACTGATGTATACAGTCTTGGTGTAATCTTGTTAGAACTCCTAACAAGGAAGCCACCTGGTGAGGCAATGAATGGTGTTGATTTACCTCAGTGGGTTGCCTCTATTGTTAAAGAGGAGTGGACAAATGAGGTTTTCGATGTCGATTTGATGAGAGATCCATCAACAAATGGTGATGAATTGTTGAACACTTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGGCCAGAAGTTCAGCTGATACTTCAGCAGCTAGAAGAGATTAGACCACAGATATCATCAGCCATTTCTAGTGATGAAGGAGCTATCCCTTCCACAAGTGAATAA 2352 0.3963 MDTSTTEKNNNNTHQILQFGMKNAAKRHNCYTNPLHFFRLFFICIFWVNFLWLPMKPVLCEERWDGVVVTQSNFLALQAFKEELIDPKGYLKTWNDSGFGACSGAWAGIKCAQGQVIVIQLPWKGLKGKITERIGQLEGLRKLSLHNNQISGSIPSSLGLLINLRGVQLFNNRLTGSIPPSLGYCPMLQSLDFSNNLLTGIIPESLGNATKLYWLNLSFNSLSGSIPTSLTSLNSLTFISLQHNNLSGSIPNSWGGSLKNGFSRLQNLVLDHNFLTGTIPASLGKLRELREISVGHNQFSGHIPQSIGNISNLKQLDFSSNNLSGEIPISFDNLDSLNFFNVSHNNLSGPVPTLLAQKFNSSSFVGNIQLCGYSPSTRCPSLAPSEVPAAPSEAPKHRHHKKLGTKDIILIVAGVLLVVLIIVCCILLFCLFRKRKTSNVEGGQATARAAAAGRTGKGVPPISGEVEAGSDAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKNHRDFESEVNVLGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHAHGPEIRIDWPIRMNIAQGMARGLLYLHSHENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTRKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVDLMRDPSTNGDELLNTLKLALHCVDPSPSARPEVQLILQQLEEIRPQISSAISSDEGAIPSTSE 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04412 783 Gene3D Ribonuclease Inhibitor 73 185 IPR032675 -
Trre9g04412 783 Gene3D Ribonuclease Inhibitor 186 258 IPR032675 -
Trre9g04412 783 SUPERFAMILY L domain-like 72 371 - -
Trre9g04412 783 ProSiteProfiles Leucine-rich repeat profile. 139 161 IPR001611 GO:0005515
Trre9g04412 783 CDD STKc_IRAK 498 763 - -
Trre9g04412 783 FunFam Os07g0541700 protein 569 655 - -
Trre9g04412 783 Pfam Protein tyrosine and serine/threonine kinase 495 760 IPR001245 GO:0004672|GO:0006468
Trre9g04412 783 SUPERFAMILY Protein kinase-like (PK-like) 496 765 IPR011009 -
Trre9g04412 783 Pfam Leucine rich repeat N-terminal domain 75 111 IPR013210 -
Trre9g04412 783 Gene3D Ribonuclease Inhibitor 259 381 IPR032675 -
Trre9g04412 783 Gene3D Phosphorylase Kinase; domain 1 498 569 - -
Trre9g04412 783 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 259 379 - -
Trre9g04412 783 Gene3D Transferase(Phosphotransferase) domain 1 570 777 - -
Trre9g04412 783 FunFam Leucine-rich repeat receptor protein kinase EMS1 183 258 - -
Trre9g04412 783 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 202 763 - -
Trre9g04412 783 Pfam Leucine rich repeat 287 347 IPR001611 GO:0005515
Trre9g04412 783 Pfam Leucine rich repeat 188 246 IPR001611 GO:0005515
Trre9g04412 783 ProSiteProfiles Protein kinase domain profile. 492 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04412 783 FunFam Leucine-rich repeat receptor-like kinase 72 182 - -
Trre9g04412 783 FunFam Leucine-rich repeat receptor-like protein kinase 477 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04412 Trre-Chr9 51842062 51844621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04412 64 765 Receptor kinase-like Gene Family AT3G51740 57.935 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre9g04412 PK_Tyr_Ser-Thr 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04412 - - gmx:100811174 1049.27