Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04387 ATGGCTTCCAAAACAACCTCTTCATTCTTCTTCCTCTCTCTTCTAGCATTCCTTTCAATACCAAACTTTGTTATTGCCTCTAATAAAATCACCGCAATCTTTGCCTTCGGTGACTCCACCATCGATGCGGGCAACAACAACCACATAAACACCCTCTTCCGCGGTGACCATTTGCCCTACGGCTGCGATTTTCCAAACCACGTCCCAACCGGTAGATTCTCAAACGGAAAAATATCGACCGATTATCTTAGCCAAATTCTAGGCATTAAGGATTTATTGCCTGCTTTTCTTGACCCGCAAGTTACCGATAATGATTTATTAACTGGGGTTAGTTTCGGCTCGGGTGGTTCGGGTTTGGATAGCCGTACAGTGGCCCTAGCTAAGATCTTGGATTTGAGTTCACAATTTGAGTTGTTTGAGCAAGCTTTGTTGAGGATCAGAAGATTTGTTGGTAATGAAAAGGCTAATGATATAATCCATAATGCATTGTTTGTGATTAGTATTGGGACTAATGATATGTTGTTCAATGTTTATATGTTGCCAACAAGTACTGTTACTCCCTATGGTTCTATTTCATCTTATCAAGATTTTTTGCTCCAAAATCTTCAGAATTTTATGCAGAGATTGTATGGAGCAGGAGGTCGTAGGATTACTGTGGCAGGTCTTCCTCCAATTGGTTGTCTTCCAATACAAGTAACATTTGATAGCATCTTACCTAGCCAAAATTGGCTCCAACGTGTTTGCAACGTCCAACAGAACATTGATTCTCAAAATTACAACGGTAAACTTCAATCCAATGTTCATTTATTGCAAGCCACACTCCAAGATGTTAAGGTTGCTTATTTCGATATCTATACACCTATTCTTGATATGGTCCAATACCCAGCCAAATACGGTTTCGGGCATTCACTTCTAGGATGCTGCGGAACAGGGGTGTTGGAGATGGGTCCTGTGTGCAATAAAGATGACATTATCTGCCCTGATCCATCTAAGTATCTGTTTTGGGATGCTGTTCACCTTACACAAGAAGGGTACTCAGTTATTGCCAAAAATGGTCAAACTCTGCTCCCATACCTTACTAGTTAA 1086 0.4088 MASKTTSSFFFLSLLAFLSIPNFVIASNKITAIFAFGDSTIDAGNNNHINTLFRGDHLPYGCDFPNHVPTGRFSNGKISTDYLSQILGIKDLLPAFLDPQVTDNDLLTGVSFGSGGSGLDSRTVALAKILDLSSQFELFEQALLRIRRFVGNEKANDIIHNALFVISIGTNDMLFNVYMLPTSTVTPYGSISSYQDFLLQNLQNFMQRLYGAGGRRITVAGLPPIGCLPIQVTFDSILPSQNWLQRVCNVQQNIDSQNYNGKLQSNVHLLQATLQDVKVAYFDIYTPILDMVQYPAKYGFGHSLLGCCGTGVLEMGPVCNKDDIICPDPSKYLFWDAVHLTQEGYSVIAKNGQTLLPYLTS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04387 361 Gene3D SGNH hydrolase 22 357 IPR036514 -
Trre9g04387 361 CDD SGNH_plant_lipase_like 31 351 IPR035669 -
Trre9g04387 361 SUPERFAMILY SGNH hydrolase 33 351 - -
Trre9g04387 361 PANTHER GDSL ESTERASE/LIPASE EXL3 16 351 - -
Trre9g04387 361 Pfam GDSL-like Lipase/Acylhydrolase 33 350 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04387 Trre-Chr9 51643335 51645622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04387 10 350 Pollen Coat Proteome AT1G75930 34.294 1.09e-59 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04387 - - aprc:113874497 512.301