Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04362 ATGGCTTTTTCCAACAACGTAGAAGCAATTTTACAATTTCTAAGAAAAAATGGATTATCAGAAGCAGAATCTGCTCTCAGACAAGACATCATTGAAAAGAACAACACTGGTTCTGATTTTGATGTTGATGTTGATATTGATGTTGCTTCCTTTGACTATGAGAAATTCTTCTTTCCTATGGTTCCTCCTCCTCCTAAAGTTAAAGTCCGATCATTTTCACGGCCGCCGGAGTTTGCCTCCGGCGACGGTCAATTCTTCAAATCAAACTCTGTTTCTTCTGAAGAACAGTTTGTTAGCATGGCTTCTTCTACTTCTCGTTCTCGTGTTTCTTCTTCAGAATTCATCAATCCATATGGAATCAATTCATCATCTCAGACTTTGAATGATTCTGAATCTTCATCTGATAGATTGTCACAATTCGGCACAGCGCGTGATTATCACGATTTCGATATGCAACATGAGCCATATTGGTATAATGAAAATGATGATGATGATTTCATGACTCCTGATTTTGAAGGACCGGATTTCTTTGCGTGTCAAAGTGAAGATAAGTTCGTTACAGAAAATCAATTTGAAAATTCCGTGGATCTTGTTTACAACTATGAAGAAATTCGATTAGAGGGAAATGAGGGTTACATGGACAAGCCGATGAAAAGTGATGAAAATACGAATTATTCGAAAGATTACTGTCATGAGGCTGAGAAAGACGGTGTTGTGCATAATTGTGAAGTTCCGTTTTGCAAAAGCAGTCCGGTTTCGGGAGGTTCTTGTAGTGGAGATCCGATAAACTTTAGCTACCCTAATTTGAAGGAAATTGATCTTAATGATTTTCATCTGAAGGATATTATCAAGTCTTTCGATTCTATTCCGTTGCTTACCGTGAAGCAAAGTTTCGATTGCTACACTAAAAATGATAGTGGTGAGAGGTACAAGGATCCCTATGACTTAACTATCGATGTTGATGAAACAAATCTACCGAATGGGATTGACGCCTATGAAGTAAGAGATGGTCGAGAGTTGAGTGAAGAATTACATGTTCCGGAGGTTGCTACAGATGGAGAGGATAATAATAATAATAATACTGATGATGAGCTCTTAAAATACATTCAAGACGATGAATACGAAGTATTTGAGCTAAGAATTGTTCATAGAAAGAACAGGACTGGATTTGAAGAAAACAAAGAAGTGCCAATTGTGATAAACTCAGTCATGGCTGGCAGGTACTACATAACAGAATATCTCGGCTCGGCTGCCTTTAGTAGGGTTGTTCAAGCACACGATCTTCAGATGGGAATCGATGTTTGTTTGAAGATTATTAAAAATGACAAGGATTTCTTTGATCAAAGTCTAGATGAAATCAAGCTTCTGAAACTAGTCAATAAGCACGACCCCGGAGATAAACACCACATTTTGCGTCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTGACAGAACTTCTGCGTGCAAACTTGTATGAATTTCAAAAATTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTACATAGATTGCAGCTTATTACTCGACAATGTTTGGAGGCATTGCAATATTTGCATAACTTGGGAATTGTTCACTGTGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAAATGTGAAGTAAAGATTATTGATCTTGGAAGCAGTTGCTTTAAAACGGACAATCTGTGCCTATATGTACAATCCCGATCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCGCTCGGCTGTATTTTGGCTGAGCTATGCTCCGGTGAAGTGCTGTTTCCAAATGATTCAGTTGTGATGATTCTCGCACGCATGATTGGAATGTTTGGTCCTTTTGATATGGAGATGTTGGTGAAAGGGCAGGAAACACACAAGTACTTCACCAAAGAATATGATATTTACTTTGTGAATGAGGAGACAGATCAACTAGAGTACATAATTCCAGAAGAATCATCATTGGAGCAGCACCTACAGATCACCGATATTATGTTTATCGACTTCGTCAGTTACTTGCTTAACGTCAACCCCAAAAGAAGACCTACTGCAAGACAGGCACTAAAACATCCATGGCTTTCCTATGATTACAAGTCCATGTAA 2154 0.3802 MAFSNNVEAILQFLRKNGLSEAESALRQDIIEKNNTGSDFDVDVDIDVASFDYEKFFFPMVPPPPKVKVRSFSRPPEFASGDGQFFKSNSVSSEEQFVSMASSTSRSRVSSSEFINPYGINSSSQTLNDSESSSDRLSQFGTARDYHDFDMQHEPYWYNENDDDDFMTPDFEGPDFFACQSEDKFVTENQFENSVDLVYNYEEIRLEGNEGYMDKPMKSDENTNYSKDYCHEAEKDGVVHNCEVPFCKSSPVSGGSCSGDPINFSYPNLKEIDLNDFHLKDIIKSFDSIPLLTVKQSFDCYTKNDSGERYKDPYDLTIDVDETNLPNGIDAYEVRDGRELSEELHVPEVATDGEDNNNNNTDDELLKYIQDDEYEVFELRIVHRKNRTGFEENKEVPIVINSVMAGRYYITEYLGSAAFSRVVQAHDLQMGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPGDKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLHRLQLITRQCLEALQYLHNLGIVHCDLKPENILIKSYKKCEVKIIDLGSSCFKTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDSVVMILARMIGMFGPFDMEMLVKGQETHKYFTKEYDIYFVNEETDQLEYIIPEESSLEQHLQITDIMFIDFVSYLLNVNPKRRPTARQALKHPWLSYDYKSM 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04362 717 Pfam Protein kinase domain 410 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04362 717 PANTHER DUAL SPECIFICITY PROTEIN KINASE 130 711 - -
Trre9g04362 717 Gene3D Phosphorylase Kinase; domain 1 402 489 - -
Trre9g04362 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Trre9g04362 717 FunFam Putative serine/threonine-protein kinase dyrk2 402 489 - -
Trre9g04362 717 SUPERFAMILY Protein kinase-like (PK-like) 397 712 IPR011009 -
Trre9g04362 717 CDD PKc_DYRK_like 408 710 - -
Trre9g04362 717 FunFam Serine/threonine-protein kinase ppk15 487 711 - -
Trre9g04362 717 SMART serkin_6 408 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04362 717 ProSiteProfiles Protein kinase domain profile. 408 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04362 717 Gene3D Transferase(Phosphotransferase) domain 1 462 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04362 Trre-Chr9 51420736 51424235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04362 405 705 MAP Kinase Gene Family AT5G19010 31.776 2.36e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Trre9g04362 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04362 - - gmx:100783988 1055.82