Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04353 ATGGAGACAATACTCTTCTTTGTTATCATCTTCACAGTTCTTTTCTTCCTTCACCGGAGCACTCGCCGGCGGCGACACAATCTCCCGCCGGGAAGTCTAGGACTACCCTTTATAGGTGAAACCTTCCAGCTTATCTCAGCTTACAAAACCGACAACCCAGAACCATTCATAGACAAACGAGTGAACCGGTACGGTTCAATTTTCACAACTCATATATTTGGTGAACCGACTGTTTTTTCAGCTGACCCGGAAACGAACCGGTTTATTTTAATGAATGAAGGGAAACTTTTTGAATGTAGTTATCCCGGTTCAATATCAAACCTTTTGGGAAAACATTCTTTGCTTCTTATGAAAGGTTCTCTTCATAAGAGAATGCATTCACTTACTATGAGTTTTGCTAATTCTTCTATTATTAAAGATCATCTTCTTGTTGATATTGATCGGCTTATTCGGCTTAATTTGGATTCTTGGTCCGACCGGGTTTTGCTCATGGAGGAGGCCAAGAAGATAACGTTTGAGTTGACAGTGAAGCAGTTGATGAGTTTTGATCCAGGTGAATGGACTGAGACTTTGAGGAAAGAGTACGTTCTCGTGATTGAAGGATTTTTCACACTTCCCTTACCATTACTCTCTAGTACCTACCGTAGGGCTATCAAGGCAAGGACGAAGGTGGCAGAGGCATTAACATTGATTGTGAGGCAGAGAAGAAAAGAAAGTGTAATGGGGGAGACAAAGAATGACATGCTAGGGGCATTGTTGGCTTCCGGCGACCAATTTTCTGACGAGCAAATAGTCGATTTTATGTTGGCATTGCTCGTCGCCGGCTATGAAACCACCTCTACCATAATGACTCTTGCGGTCAAGTTTCTCACCGAGAATCCTTTAGCATTGGCACAACTCAAGGAAGAGCATGATCAAATAAGAGCAAAGAAGAGTTGCCAAGAGGAACCATTGGAGTGGACAGATTACAAGTCAATGGCATTTACTCAATGTGCTGTGAATGAAACTTTAAGGATGGCAAATATAATAGGTGGGATATTTAGGAGAGCAATGACAGACATCAATATCAAAGGCTACACTATTCCAAAGGGGTGGAAGGTCTTTGCATCATTTCGTGCCGTACATCTAAACCCTGATCATTTTAAAGACGCTCGTACCTTCAATCCATGGAGATGGCAGAGAAAATCAGAAGCAACAAGCCCAGGAAATATATACACACCGTTTGGAGGAGGTCCACGGCTGTGCCCCGGCTATGAGCTAGCTAGAGTTGTGCTATCGGCATTTCTTCACCGTTTTGTCACTCGCTACAGTTGGTCTCCTGCAGAAGAAGATAAGTTGGTGTTTTTCCCGACCACTCGGACGCAGAAGAGGTATCCTATTATAGTGAAGCCTAGAGTGCAATCGAATTCGTTCATGTAA 1419 0.4313 METILFFVIIFTVLFFLHRSTRRRRHNLPPGSLGLPFIGETFQLISAYKTDNPEPFIDKRVNRYGSIFTTHIFGEPTVFSADPETNRFILMNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLVDIDRLIRLNLDSWSDRVLLMEEAKKITFELTVKQLMSFDPGEWTETLRKEYVLVIEGFFTLPLPLLSSTYRRAIKARTKVAEALTLIVRQRRKESVMGETKNDMLGALLASGDQFSDEQIVDFMLALLVAGYETTSTIMTLAVKFLTENPLALAQLKEEHDQIRAKKSCQEEPLEWTDYKSMAFTQCAVNETLRMANIIGGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHFKDARTFNPWRWQRKSEATSPGNIYTPFGGGPRLCPGYELARVVLSAFLHRFVTRYSWSPAEEDKLVFFPTTRTQKRYPIIVKPRVQSNSFM 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04353 472 CDD CYP90-like 60 464 - -
Trre9g04353 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Trre9g04353 472 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 Pfam Cytochrome P450 204 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 Gene3D Cytochrome P450 17 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 PANTHER CYTOCHROME P450 26 25 447 - -
Trre9g04353 472 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04353 472 FunFam Cytochrome P450 90A1 18 465 - -
Trre9g04353 472 SUPERFAMILY Cytochrome P450 22 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04353 Trre-Chr9 51340718 51347140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04353 117 465 Cytochrome P450 AT5G05690 79.714 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04353 K09588 - gmx:100781291 835.869