Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04345 ATGTGGAGCACCTCTATTTCAAGGGTTCACTTTCCTTCTCTTTATGTCTATGATTCTGTTGTTTTCTCTTCTCCATATACCAGATCTGTATTTATGGTTTCACTACAAAGATCTCATGAAAATAATGAGGAACAACTTGCTCACTGGTCTTTGCCAGACGATGACCTTGTTTTACTAGCTATTGTTGGTATCAAGGACCCTTGTCGACCTGGTGTCAAAGATTCAGTACAGCTTTGCCAAAAAGCCGGTGTTAAGAGAGAACTGTCATTGAAGGAAAAACATTTCGAGCCTTATCAGATTCAGAGAGAGAAGAAATTGCGGACTCGATATTGGTAG 336 0.3988 MWSTSISRVHFPSLYVYDSVVFSSPYTRSVFMVSLQRSHENNEEQLAHWSLPDDDLVLLAIVGIKDPCRPGVKDSVQLCQKAGVKRELSLKEKHFEPYQIQREKKLRTRYW 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04345 111 Gene3D - 41 67 IPR023299 GO:0000166
Trre9g04345 111 PANTHER CATION TRANSPORTING ATPASE 37 86 - -
Trre9g04345 111 Gene3D - 68 85 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04345 Trre-Chr9 51247786 51249340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04345 42 85 Primary Pumps ATPases AT4G29900 79.545 1.59e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04345 K01537 - gmx:100790157 86.2705