Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04321 ATGTCTGACGCTTTGATCAATGGATTGGCTGGAGCTGGTGGAGGGATCATTGCTCAACTTATCACATACCCTCTTCAAACTGTAAACACTCGTCAACAAACCAATCGTGATCCGAAGGACAAGAAGAATCTTGGAACTTTCCACCAAATGTGTCAGGTTGTGAAACATGAGGGGTGGGAACGATTGTATGGAGGCTTGACGCCATCACTTGTCGGTACAGCTACATCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACCGAGCTGAAGCAGCAGCATTAGAGAAGAAAATGCTAGGCATTGGTGATGGATCTGTTGGAATGTTCTCCTCACTTATTGTTGCTGCTTTATCTGGCTGTGTTAACGTGCTCTTGACAAATCCCATATGGCTAGTTGTTACTCGCATGCAGACGCATAGAAAAGAGTCGAAAAGAACCCTCGCTGATCCACGGTTGTCAGACGCCATTAAAGAAACAACGATTTCTACTATTGAGCCTCGTGCTTATGGAACTAGCCATGTGATTCAAGAAGTTTATGATGAAGCTGGTGTTTTAGGTTTCTGGAAGGGCGTGTTACCAACTTTAGTCATGGTTAGCAATCCTTCCATACAGTTCATGCTGTATGAAACCTTGTTGGCGAAGTTGAAAAAAAGACGTGCTGGTAATAGCGTAACTGCGTTAGAGATATTTCTTCTTGGAGCTATCGCTAAGCTTGGAGCTACAGTTGTGACCTATCCTCTTCTTGTTGTCAAGGCAAGGCTTCAAGCTAGACAAGTTCAAAATGGAGACAAGAGACACCATTATAAAGGTACATGGGATGCTATTATTAAGATGATCCGCTATGAAGGTTTTAATGGATTTTACAAAGGCATGGGAACCAAAATTGTACAAAGTGTTCTTGCTGCAGCTGTTTTGTTTATGGTGAAAGAAGAGCTAGTTAAGCAGACACGTTACTTGCTTTCCAAGCCAAAGCTTGTGTGA 987 0.4235 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTNRDPKDKKNLGTFHQMCQVVKHEGWERLYGGLTPSLVGTATSQGVYYYFYQIFRNRAEAAALEKKMLGIGDGSVGMFSSLIVAALSGCVNVLLTNPIWLVVTRMQTHRKESKRTLADPRLSDAIKETTISTIEPRAYGTSHVIQEVYDEAGVLGFWKGVLPTLVMVSNPSIQFMLYETLLAKLKKRRAGNSVTALEIFLLGAIAKLGATVVTYPLLVVKARLQARQVQNGDKRHHYKGTWDAIIKMIRYEGFNGFYKGMGTKIVQSVLAAAVLFMVKEELVKQTRYLLSKPKLV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04321 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 90 IPR018108 -
Trre9g04321 328 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 321 IPR044712 GO:0006862|GO:0055085
Trre9g04321 328 Pfam Mitochondrial carrier protein 108 219 IPR018108 -
Trre9g04321 328 Pfam Mitochondrial carrier protein 226 315 IPR018108 -
Trre9g04321 328 Pfam Mitochondrial carrier protein 7 89 IPR018108 -
Trre9g04321 328 Gene3D Mitochondrial carrier domain 2 100 IPR023395 -
Trre9g04321 328 Gene3D Mitochondrial carrier domain 101 320 IPR023395 -
Trre9g04321 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 317 IPR018108 -
Trre9g04321 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 216 IPR018108 -
Trre9g04321 328 SUPERFAMILY Mitochondrial carrier 3 313 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04321 Trre-Chr9 51044487 51048874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04321 24 308 Chloroplast and Mitochondria Gene Families AT2G47490 29.210 1.14e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04321 K13354 - gmx:100775784 506.908