Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04280 ATGTTCTCTTTAAAGCCATTCCTTCGTTTTCTTCTCATCTGCATTCTCATTCATCAAGCATGTTCCAATAAAGATCGCAAGGCTTACATTGTTTACATGGGTAATCATCCTAAGGGCATGGACCCTGCCACTTCACCTTCACTTCACTCCAAAATGGCTCAAAATGTCCTTGGAAGTGATTATGAACCGGGAGTCATACTTCACAGCTATAAGAAGAGCTTTAACGGATTCGTCATGAAGTTAACAGAAGATGAAGCAGAAACAATGGCTGAAATGGACGATGTGGTATCTGTTTTCCCAAACACAAAGAATCATCTTCACACAACAAAATCATGGGACTTCATAGACCTCCCACAACAAGTCAATAGAATGACTTTGGAGAGTGACATTATTGTTGGAGTATTAGATACCGGAATTTGGCCAGAATCTAAAAGCTTCATTGATGAAGGATTTGGTCCTCCACCAACAAAATGGAAGGGATCATGCCACAATTTCACCTGCAACAATAAAGTAATTGGTGCAAGATCCTTCAATATTGAAGGTAACTATAGTGCAAAGGATATCAAATCTCCAAGGGATGTAAATGGGCACGGATCACACTGTGCATCCACCGTCGCTGGAAACGCGGTTAACTCTGTAAGCCTACAAGGGTATGCCTCGGGGACAGCACGCGGAGGAGTTCCCTCAGCTCGCATTGCCGTGTACAAAGTATGTTGGGAAGGATCAGGTTGCGGTGAGGCTGATATTCTTGCGGCATTTGATGCAGCAATAGCTGACGGTGTTGATGTTCTTTCTGTTTCTATTGGATCTAAGAAATTAATATATCATGAATATTTTCAAAGTGCAATCAACATTGGGAGTTTCCATGCAGTGCAAAGTGGTGTATTTACTTCAAATTCTGCTAATAATTTGGGCCCTGATATTTTCACTATGACAAATTATCCACCTTGGTTACTTTCTGTGGCTGCTAGCACTTTTGGCAGAACATTTGTTACAAAAGTGAAATTGGGAAATGGTGCCATATATGAGGGATCGACAATAAACACATTTGGTCTCAAAAACAAAATGTTTCCACTGATTTTTGCAGGAGATATACCTAATACTGCTGGTGGATATAACAGTTCTGTATCCAGGTTATGTTCGGAGGACTCTGTGGATAAAGATGCAGTGAAGGGAAAAATAGTTTTATGTGAGGGTAGGAGACAAGTGGGGTTTTTCTCTGGGGCAATTGGTGTAATATTTGGAGGTGTTGCTCCACAAGATTTGCCAAAAACATTTGCATTGCCAGCAACGTTCCTTAGTCTAAGGAACGTAATAGAAATAGAAGATTACATTAAATCAACAAGAAATGCAACTGCCACAATATTTAAGAGTGAGGAAGTCGAAGATTTGATGTCACCTTATATAGCTTCGTTTTCATCAAGAGGTCCAAACCCAATTACACCAAATATTCTCAAGCCTGATATCGCTGCCCCGGGAGTTAATGTTATAGCTGCATGGACTCCACTAAATCCAATTTCAAATGTTGAAGGCGACAATAGAAAAGTACAATATCAAATAATCTCAGGAACTTCAATGGCATGTCCTCATACCGCTGCGGCTGCTGCATACGTTAAATCATTTCACCCTACATGGTCTCCTGCTATGATCAAATCTGCATTGATGACCACCGCTACTCCAATGAGCTCTACTATAAATCCTGAGGCTGAATTCGCATACGGCGCAGGGCAAATTAGTCCTGTTAACGCAACAAATCCGGGTTTAGTATATGATATCAATGAAGCAGATTATATCGAGTTCTTATGCGGAGAAGGGTACACGACTAAACAACTTCAAATTCTTACTCATCAACAGAGTGATTGCAAGGAAAATGCTAATGAGAACGCTGTAAACAACTTGAATCTACCATCATTCGCACTTAAAGGGAACAATCCATTTATCGGTCATGCTTTTAATAGAACAGTTACAAATGTGGGATCTGCAAATTCTACTTATAAAGCAAGAGTAGTGTCTTCATCTTTGTTGGAAATTCAAGTGATACCTGATGTTTTGTCTTTCACATCTATAGGGCAAAAAAAATCATTCTCACTTACAATAGAAGGGAACATCAATGTGGAAATAATGTCTGCTTCTTTGATTTGGGATGATGGTAATTATCAAGTTAGAAGCCCAATTGTAGTGTATGAGGTGTAA 2193 0.3976 MFSLKPFLRFLLICILIHQACSNKDRKAYIVYMGNHPKGMDPATSPSLHSKMAQNVLGSDYEPGVILHSYKKSFNGFVMKLTEDEAETMAEMDDVVSVFPNTKNHLHTTKSWDFIDLPQQVNRMTLESDIIVGVLDTGIWPESKSFIDEGFGPPPTKWKGSCHNFTCNNKVIGARSFNIEGNYSAKDIKSPRDVNGHGSHCASTVAGNAVNSVSLQGYASGTARGGVPSARIAVYKVCWEGSGCGEADILAAFDAAIADGVDVLSVSIGSKKLIYHEYFQSAINIGSFHAVQSGVFTSNSANNLGPDIFTMTNYPPWLLSVAASTFGRTFVTKVKLGNGAIYEGSTINTFGLKNKMFPLIFAGDIPNTAGGYNSSVSRLCSEDSVDKDAVKGKIVLCEGRRQVGFFSGAIGVIFGGVAPQDLPKTFALPATFLSLRNVIEIEDYIKSTRNATATIFKSEEVEDLMSPYIASFSSRGPNPITPNILKPDIAAPGVNVIAAWTPLNPISNVEGDNRKVQYQIISGTSMACPHTAAAAAYVKSFHPTWSPAMIKSALMTTATPMSSTINPEAEFAYGAGQISPVNATNPGLVYDINEADYIEFLCGEGYTTKQLQILTHQQSDCKENANENAVNNLNLPSFALKGNNPFIGHAFNRTVTNVGSANSTYKARVVSSSLLEIQVIPDVLSFTSIGQKKSFSLTIEGNINVEIMSASLIWDDGNYQVRSPIVVYEV 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04280 730 CDD PA_subtilisin_like 334 455 - -
Trre9g04280 730 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 107 IPR037045 -
Trre9g04280 730 Pfam Subtilase family 128 576 IPR000209 GO:0006508|GO:0008236
Trre9g04280 730 Pfam Fibronectin type-III domain 632 727 IPR041469 -
Trre9g04280 730 ProSiteProfiles Serine proteases, subtilase domain profile. 111 584 - -
Trre9g04280 730 Gene3D - 601 730 - -
Trre9g04280 730 Gene3D Peptidase S8/S53 domain 129 597 IPR036852 GO:0004252|GO:0006508
Trre9g04280 730 Gene3D - 327 462 - -
Trre9g04280 730 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Trre9g04280 730 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Trre9g04280 730 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Trre9g04280 730 ProSitePatterns Serine proteases, subtilase family, serine active site. 523 533 IPR023828 -
Trre9g04280 730 Pfam Peptidase inhibitor I9 29 107 IPR010259 -
Trre9g04280 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 727 IPR045051 -
Trre9g04280 730 FunFam Subtilisin-like protease SBT1.5 129 338 - -
Trre9g04280 730 ProSitePatterns Serine proteases, subtilase family, histidine active site. 197 207 IPR022398 -
Trre9g04280 730 CDD Peptidases_S8_3 105 559 IPR034197 -
Trre9g04280 730 SUPERFAMILY Subtilisin-like 106 588 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04280 Trre-Chr9 50650136 50655460 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04280 11 728 Subtilisin-like Serine Gene Family AT3G46850 46.467 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04280 - - gmx:100815516 994.571