Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04277 ATGACTCTAAGTGATGATGATATTGAATGGAAGATTCTAATTTTCAATAAACTCTCCTTCCTTCTAGGTTCTTATGTGAACGACTCGACCGTAATTTCTTTGATTAAAAGCAATAAAGAACCAAAGCCTGTGCTGCAGCACTATACAAGGATTTTCAATGGCTTCGTGGTTGAACTTACAGAGAGAGAAGCCAAAAAAATGGCTGGATTGGAGGGAGTGGTATCAGTTTTTCCTAATGAAATGAGGCAGCCCCGGACAACTAAATCTTGGGATTTTATTGGCCTCTCACAATACGTAGAAAGACAGTACTCTGAAACTAATATTGTCACTGGAGTAATTGATTCTGGAATATGGCCAGAATCAGACAGTTTCAGTGATAAAGGTTTCGGTCCACCACCTGCCAAATGGAAGGGTTTTTGCGACACTACTAATTTTACTTGCAACAATAAAATAATTGGAGCAAGGTATTATATATATGGGAATAGATTGAACCCAGAAGATCTTGCATCTCCAAGAGATACACGTGGTCATGGGACTCACACATCATCCACCGCAGCTGGGAACGCGGTTGGCATGGCAAGCATGCTTGGACTTGCCCTAGGGACCGCTAGAGGTGGAGTCCCATCTGCTAGAATAGCTATGTATAAAGTCTGTTGGTCATTTGGCTGCCCAGAACAAAGTATTTTAACTGCATTCCAAGATGCAATTACAGACGGAGTTGATATAATATCAGTCTCACTTGGGTCAGAGTCAAATGTTAACAATGTCCATTTTGGAGATTCAATTTCCGTTGGATCATTCCATGCTATGCAACATGGAATCTTGACAGTGGTGTCTGCGGGGAACTTAGGTCCAAGCCCTTCAACTTTAACTAGTTTTTCACCATGGACGATTGTTGTGGCGGCTAGCACATTGAATAGAAAGTTTATCACCAAGGTGAAACTAGGAGACGGTAGCTTGTATGAGGGTATTTCATTGAACACATTTGACCTTGGGGAGAAACAATATCCTTTAATCTATGCCGGAGATGCTCCATCGGGAGTCAATCGAAGCGAGACAAGTTTCAGGTCCACATGTATCTGGGGCAGCAGGATACATAAGATCCCTACATGTCTCATGATCATCTGCTGTAGCTTTAATGACAACCGCAAACTAACGGTGATGTGGAATTTGGTTGTCATGTTGACGCTGTCAAGACTTTAA 1203 0.4198 MTLSDDDIEWKILIFNKLSFLLGSYVNDSTVISLIKSNKEPKPVLQHYTRIFNGFVVELTEREAKKMAGLEGVVSVFPNEMRQPRTTKSWDFIGLSQYVERQYSETNIVTGVIDSGIWPESDSFSDKGFGPPPAKWKGFCDTTNFTCNNKIIGARYYIYGNRLNPEDLASPRDTRGHGTHTSSTAAGNAVGMASMLGLALGTARGGVPSARIAMYKVCWSFGCPEQSILTAFQDAITDGVDIISVSLGSESNVNNVHFGDSISVGSFHAMQHGILTVVSAGNLGPSPSTLTSFSPWTIVVAASTLNRKFITKVKLGDGSLYEGISLNTFDLGEKQYPLIYAGDAPSGVNRSETSFRSTCIWGSRIHKIPTCLMIICCSFNDNRKLTVMWNLVVMLTLSRL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04277 400 Pfam Peptidase inhibitor I9 38 83 IPR010259 -
Trre9g04277 400 ProSiteProfiles Serine proteases, subtilase domain profile. 89 400 - -
Trre9g04277 400 CDD Peptidases_S8_3 83 305 IPR034197 -
Trre9g04277 400 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 84 IPR037045 -
Trre9g04277 400 SUPERFAMILY Subtilisin-like 85 333 IPR036852 GO:0004252|GO:0006508
Trre9g04277 400 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 363 IPR045051 -
Trre9g04277 400 Gene3D - 306 354 - -
Trre9g04277 400 Gene3D Peptidase S8/S53 domain 107 305 IPR036852 GO:0004252|GO:0006508
Trre9g04277 400 Pfam Subtilase family 107 311 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04277 Trre-Chr9 50585401 50588794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04277 44 345 Subtilisin-like Serine Gene Family AT5G58840 54.545 4.99e-106 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04277 - - mtr:25496696 435.647