Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04273 ATGTCCGGTATTCAACTTTTTTATCTCCTTCTTAGCCTTACTTCACTTTTGGAAAAATGTTACTCTTCTTCTGAAGATAACATGAAGACTTACATTGTCTACACTGGAAATAACATAAATGACGAAACGTCTTCATTGTTTCTTTTTCAAAATATGCTACAACAAGTTGCAGAGAGCAGTTCAATACCAAGGCCTATACTCCACCATTACAAGCGTAGTTTTGGTGGTTTTGTTGTAAAGCTAACGGAGGAAGAAGCTGATAGAATGGCTGGACTTGATGAGGTCGTGTCTGTCTTTCTTGATGAAAAAAGACAACTCCTTACTACAAGATCTTGGAATTTTATAGGCTTTCCTCAACAACCAGAGATAGAATACTCTAAATCTGATGTCATAATCGGAGTGATTGATTCTGGAATTTGGCCAGAATCAGAAAGTTTCAATGATAAAGGATTTACTCCACCACCAAACAAATGGAAGGGAACATGCCAAGCTTCTGATTTCAATTGCAACAATAAAATCATTGGAGCTAGATATTATAAAAATAATTTCGGAGAAGACTTCATGAACAATGATATTCTATCTCCGCGAGACACAACTGGGCACGGGACACATACAGCTTCAACGGCGGCTGGGAACCCAATTAGCATGACAAGTATGTTAGGCTTAGGCCAAGGGACAGCAAGAGGTGGGGCTTCATCATCACGAATTGCTGTTTACAAAGCATGTTGGTCTGATGGATGTAAAGAAGTGGACATTCTCGCTGCATTTGATGATGCTATTGCTGATGGGGTTGATATAATATCCGTCTCACTTGGAGGAAAATCAAATCAAAATATATATTTTCAAGATGGATTATCGATTGGAGCATTCCATGCGATGAAAAATGGAATATTAACCGTGTTTGCAGCAGGGAACTCAGGTCCCCAACGTTCATCCCTAACAAATTTTTCACCTTGGGCGATTGTTGTTGCTGCAAGTACATTAGATAGAAAGTTTGTTACCAAGATCAAATTAGGATATAACAGAACTTTCGAGGGTGCCTCCCTGAATACATTTGATCTTAAGGGAGAATTGTTTCCTATTATCTATGGTGGTGATGCACCAAATACTGAAGCAGGTTTCAATAAAGATTTATCCAGAAATTGCCTAATCGGATCGTTGGATAACAAATTGGTAGAGGGTAAAATTGTTCTATGTGAAGGAAGCGAAGGAGCCGCCGAGGCCCTTAGAGCAGGGGCTGTTGGTGTCTTGACACAGGGACACAAATTTATGGATGCAACATACTCTTTTCCCTTACCTGGATGTTACCTTCAATCGACGGATGCTGCAAATATACATAAATACATACACTCTACAAGTACTCCGACTGCAACCATCTATAAGACAACTGAGTTCAAAGATAATTTGGCGCCCATGGTTGCCTCTTTCTCGTCAAGGGGTCCAAATAATGCTACACCTGAAATTCTTAAGCCGGATTTAATTGCTCCTGGAGTAAACATTATAGCTAGTTGGTCTCCAATTTGTCCGATTTCCGATACTTTCGGTGAGAATAGAAAATTGGAGTTCAACATTGTATCGGGAACATCAATGTCATGTCCACATGTGGTTGGTGCAGCAGCGTACATTAAATCCTTTAATCTTACATGGTCACCTGCCACTATTCATTCAGCACTTATGACAACAGCTAAACAAATAAGTCCAGACAATCATGCAGAATTTGCTTATGGAGCTGGTCAAATTGACCCTATAAAGGCTTTGAATCCCGGTTTAGTATATGATGCAAATGAAGTAGACTACATAACGTTTTTATGTGGTCAAGGTTTCAATACATCAACATTACAACTAATCACAGGCGAAAAAATCATTTGTTCAGAAATAGCATATACAACAGCACGTGACTTAAATTATCCTTCATTTGCTCTTAAAGTCCCACATCCCAAACATCATATAAGTGGAAGTTTCAAAAGGACCGTTACAAATGTTGGATCACCGAATTCTACATATATAGCCATTTTGACACTTTCTAAAGGACTTAATATTTCAGTGAATCCTGATGTTTTGTATTTCACTTCATTGGGAGAAAAACAAACATATGTTCTTACTATAGATGGAAAAATTAAGAAATCTATTGAGTCAACTTCTTTGATTTGGGATGATGGTAAATATCAAGTGAGAAGTCCTATTGTTGTATTTGATGAACGGATAGAAAAAGGAAGGGGTGTTAGTTTCTATTGCACAAATTACATATATATTGTAATTTTTAATTTATTAGTTTATATTATTCTTACATAA 2292 0.3757 MSGIQLFYLLLSLTSLLEKCYSSSEDNMKTYIVYTGNNINDETSSLFLFQNMLQQVAESSSIPRPILHHYKRSFGGFVVKLTEEEADRMAGLDEVVSVFLDEKRQLLTTRSWNFIGFPQQPEIEYSKSDVIIGVIDSGIWPESESFNDKGFTPPPNKWKGTCQASDFNCNNKIIGARYYKNNFGEDFMNNDILSPRDTTGHGTHTASTAAGNPISMTSMLGLGQGTARGGASSSRIAVYKACWSDGCKEVDILAAFDDAIADGVDIISVSLGGKSNQNIYFQDGLSIGAFHAMKNGILTVFAAGNSGPQRSSLTNFSPWAIVVAASTLDRKFVTKIKLGYNRTFEGASLNTFDLKGELFPIIYGGDAPNTEAGFNKDLSRNCLIGSLDNKLVEGKIVLCEGSEGAAEALRAGAVGVLTQGHKFMDATYSFPLPGCYLQSTDAANIHKYIHSTSTPTATIYKTTEFKDNLAPMVASFSSRGPNNATPEILKPDLIAPGVNIIASWSPICPISDTFGENRKLEFNIVSGTSMSCPHVVGAAAYIKSFNLTWSPATIHSALMTTAKQISPDNHAEFAYGAGQIDPIKALNPGLVYDANEVDYITFLCGQGFNTSTLQLITGEKIICSEIAYTTARDLNYPSFALKVPHPKHHISGSFKRTVTNVGSPNSTYIAILTLSKGLNISVNPDVLYFTSLGEKQTYVLTIDGKIKKSIESTSLIWDDGKYQVRSPIVVFDERIEKGRGVSFYCTNYIYIVIFNLLVYIILT 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04273 763 SUPERFAMILY Subtilisin-like 106 590 IPR036852 GO:0004252|GO:0006508
Trre9g04273 763 Gene3D - 603 732 - -
Trre9g04273 763 CDD Peptidases_S8_3 105 562 IPR034197 -
Trre9g04273 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 106 IPR037045 -
Trre9g04273 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Trre9g04273 763 Pfam Peptidase inhibitor I9 30 106 IPR010259 -
Trre9g04273 763 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Trre9g04273 763 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Trre9g04273 763 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Trre9g04273 763 Pfam Fibronectin type-III domain 633 730 IPR041469 -
Trre9g04273 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 730 IPR045051 -
Trre9g04273 763 CDD PA_subtilisin_like 336 459 - -
Trre9g04273 763 Pfam Subtilase family 128 578 IPR000209 GO:0006508|GO:0008236
Trre9g04273 763 Gene3D Peptidase S8/S53 domain 129 599 IPR036852 GO:0004252|GO:0006508
Trre9g04273 763 ProSiteProfiles Serine proteases, subtilase domain profile. 111 586 - -
Trre9g04273 763 Gene3D - 329 466 - -
Trre9g04273 763 FunFam Subtilisin-like protease SBT1.5 129 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04273 Trre-Chr9 50518221 50524953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04273 8 731 Subtilisin-like Serine Gene Family AT3G46850 46.800 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04273 - - cam:101506276 1007.67