LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre9g04248	ATGGACATCAAAACAACTAAAAATGATATTGTACCCCAAAAAATAGCCTGTGTGCCGTGGAAGGTCTGCAATAAAAAGAGAGTTTACATTGGGAGTGTAATTCTCCTTCTTGTTATTCTTCTGGCCATTGTGTCAACAATTCTGGTGCTCAAATTTCACCACTCATCTTCTAAGGATGATGATCATAAGGATCCAAAAGATGACCCAACTGTTTGGGTTTTCCCAACACCAACTTCTCCTAAAAATGAGCTAAAGCCATATATCATCTATACTGGTGGAGAAGGAGAATTTAAAGATGAAGCTACAGCATTATCGTTATACCACCATTTGCTACAAGAAGTCATACCAAGAAATTCTCCATCCAGACCAATATTGAGATATTATTGGAATTGGAAAACCTTTAGCGGTTTTGTGGCAAACCTGACGGATGAAGAGGCAAGTAAAATGGCAGGTTTGAAAGGGGTGGTATCAGTTTCTCCAGAGGTTATATACTACCCGGATAGCACAAGCAAGAAGTGGAAACACCAGAGAAGAAAGAAGAAATGGGCAGACCCTACACACACCGCTCAACTAACATTGATCAAGCCACCACCTCCACCAAAACCACCACCAGATGGTGGTACTCGAACGATGGCTATAGTGCTTCCGAAGGATGGGTCGGCGAGGGAATATGGCGCCGCCTCATGCCTTCAATGTCGAATTTTAGAGAATTGGGGCTTGGATGGCAATAGCCCTGATATTTTCTGTGTGACAAAGGGCTTCAAAACAGAGGTTTGGAAGTCAAAAGTTGCAGATCCTTCGACAACTGTGAGGAGAAAACGGGTTGCATGCAGGTGGGTCAGACCATTGCTGCCACCAAAATCATCGAATGCAGGTTTACCTCCAGAGAAGAATGGGTCGCAGGTTTCGTCAATGCACTTGCTGCCCCAGCGTACTCCGTCAAAACCACCAGACCTGGGTAGTAGTGTTGGGGTGCGTAAAATCTTCTTTGAGCAAGATAAAATGGAGTCAAATCATTACACTGGGTGTCGCGAGTAG	1038	0.4412	MDIKTTKNDIVPQKIACVPWKVCNKKRVYIGSVILLLVILLAIVSTILVLKFHHSSSKDDDHKDPKDDPTVWVFPTPTSPKNELKPYIIYTGGEGEFKDEATALSLYHHLLQEVIPRNSPSRPILRYYWNWKTFSGFVANLTDEEASKMAGLKGVVSVSPEVIYYPDSTSKKWKHQRRKKKWADPTHTAQLTLIKPPPPPKPPPDGGTRTMAIVLPKDGSAREYGAASCLQCRILENWGLDGNSPDIFCVTKGFKTEVWKSKVADPSTTVRRKRVACRWVRPLLPPKSSNAGLPPEKNGSQVSSMHLLPQRTPSKPPDLGSSVGVRKIFFEQDKMESNHYTGCRE	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre9g04248	345	MobiDBLite	consensus disorder prediction	192	206	-	-
	Trre9g04248	345	MobiDBLite	consensus disorder prediction	286	322	-	-
	Trre9g04248	345	MobiDBLite	consensus disorder prediction	293	310	-	-
	Trre9g04248	345	MobiDBLite	consensus disorder prediction	56	77	-	-
	Trre9g04248	345	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	76	165	IPR037045	-
	Trre9g04248	345	MobiDBLite	consensus disorder prediction	175	207	-	-
	Trre9g04248	345	Pfam	Peptidase inhibitor I9	87	165	IPR010259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre9g04248	Trre-Chr9	50293019	50298714	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre9g04248	104	164	Subtilisin-like Serine Gene Family	AT4G15040	40.984	7.59e-08	52.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre9g04248	-		K25898	gmx:100784447	78.1814