Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04205 ATGGCAATTGGATTCATGGAAGTACATCTTATCAAAGCTAAAGGCCTCAATAGCAGTTGTTTCTTTGGTGGAATTGAGGATCCCTATGTTTTGGTACAATATCAAGGCCAAGAGAAGAGGAGCAATATCGCTAAAGGTAGAGGCAGAAATCATTTATGGGATGAGAAATTTATTTTCAAAGTAGAAAATCATGGATCAAGTGATAAAAACAAACTCATTTTCAAAATAATGGACAAAGACACCATTTCTGCTGATGACTTTATTGGACAAGCCATAATCTATGTAAAGGATTTATTGGCTGAAAATGGAGTTGCTAAGCTACCACCTCTTAAGTATAGAGTGATTCGTGCTGATCAGTCTTATCGTGGAGAAATTGATGTTGCCATTACTTTTACTCCAAAGGTGGAAGATGAATTAATTGAAGAAGACATTGGAGGATGGAAAGAAAGTAATTACTATCTATCTTAG 468 0.3547 MAIGFMEVHLIKAKGLNSSCFFGGIEDPYVLVQYQGQEKRSNIAKGRGRNHLWDEKFIFKVENHGSSDKNKLIFKIMDKDTISADDFIGQAIIYVKDLLAENGVAKLPPLKYRVIRADQSYRGEIDVAITFTPKVEDELIEEDIGGWKESNYYLS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04205 155 Gene3D C2 domain 2 134 IPR035892 -
Trre9g04205 155 SMART C2_3c 5 107 IPR000008 -
Trre9g04205 155 Pfam C2 domain 6 102 IPR000008 -
Trre9g04205 155 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Trre9g04205 155 PANTHER C2 DOMAIN-CONTAINING 3 135 - -
Trre9g04205 155 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 135 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04205 Trre-Chr9 49812808 49814589 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04205 3 100 C2H2 Transcription Factor Family AT4G21160 31.313 8.54e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04205 - - gmx:100791344 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g04205 9 49812808 49814589 Trre9g04205 9 49812808 49814589 ECH