Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04195 ATGAAAACGCTTTTTTCTTCTAACAAAAGTTGTGGTTGCATTAAATTAAAATCCTCTAATGTCCTTCAACCCTCTCAAAAACCAAAAATATCCATTTACCAAAATAAAAACCCTAAGAGGATCATTTCCTCCACCACCACTTCCTGCAACGGCAACGCCGGCGATGAAAATTATACATCCACTACCATCTCGGACGACAACGACAAAAATAATTATGGTATTTTAAAATCGGGTACAAAACTCGTCGATAGCGTTGCCATCGAGAAGGAGTCTGATGAGCCGTACGAAGATTTCCGAAGCTCGATACTTCAAATGATCTTGGAGAGAAATATTTACTCTGAAAAAGATCTACAAGAACTTCTTGAATGTTTTCTTCAGCTTAATGCAAAGTGTCACCACCATATCATTGTTGAAGCTTTCATGGAGATTTGTGAAAAAATATTCCCTAAGAAGGTTTGTGGTGATGTTGCTGGTGGTGGAAGTGGAAGAAACATCGAAGGGTTTGATGGAGACCTTCTCCCAGGTTCTCCTGGCTTTCTCCAGGTTTATCCTGGCTTTCTCTCCAAGTCCTCTTGGCTATTCACCTCAGATAAGGTCTTACCTCAGTGTTCTTCCTTGCTGTCGGCTTGTCTTCACGACCACCGTTTTGCAACTCTGCATCCTTCCTCTCCGCCGCCGGTTCATTGTGCTCTGAGTTTATCAAAACGGAAGTCACTGTGGACTACACCATGGGTTTCTAATCTCAGATCTGTCTCTGCAACTTACCATCAGGTTGAGAAAACCTTCCAACTTGTGGTGAATCTGAAGCCACCCATTCTCCCACCGCCAGAGCCGCCTCCGACAGGTTTTTGTTTAAATCTTTTCTCAATTGATGAACTGTTAGCTATTGATTGTGTTTTCCGTCCTCCACCAAAACCACCATGGCTGTATTGGGCTTGTTTTCACCTTGCTTGGATGGTGTTTGCTGAAATGCCTCAACAAAGATTTAAGTTTTTGGATAAGAAGGGCTTGGTAGGAACATTACCTAAACTCAAAACTCGCGAGAAAAAGTTCAAACCAATCGCCGATCATGTCAACACCGTTCACCACCTTCACGATCCAACCACTTTCCCTTTCAAATGGTCATGGCGTGATGTTTCTATCAAAGTTCAAAACATGCGTCATCAATACATCGGTGTTAAACACAAGATTCGTCTTTCTTCTCATTCTCATCAATTCAATTGGAATGATGGTCTTATTCATTGGGAAAATTTTCTCAATTATAAACAAGTTTTTGGGTTTGAAATTGATGATTCTGATTCTGATGATGATAATGACAACGGCGAAAACAATGATGGTAGTGATCATGATGACGATGATGATGTTAGGGAAGAAGAATTGAAGAGATTGGGATTGGGGGTTTTGAAATTGAGGGAGGTTATGGTGAAGAGAGAAGAGAGGAGGAGGGAGAGGGAGTTTGTGAAGGAGAAAGAGGAGTGGAAAAGGAAGGAATTTGAGTTTAAGAGAGGGGAATGTTGTTGTAGTGGTGAGAGGGAATTTGAATTGGGGATGGAGGAGACGGGTTCAAGATGGGTGAAGAGGGAGATTGAGAAGAGGGTTAGGTTAGAGAAGGAGCTTGAGGAGGAGAAGAGGAGGAGGAAGAAAGTGGAGGAGAAGATGGAGGAAGAAGAGATGGAGTGGAGGGAAAGGATGGTGGCTATGCAGATTGAACATGAGAAACAGATGATGCAGATGCATGCCGAGGCTTGTCAGAATCAAATGCAAGTTCTTGGAGTTATGGCTAGAATACTTTGTCAGTGTTTTGGTTCGGGACATGATGGATTGGGTGGTGCTGGTTTAGGGACATTGCCTCCTCAGGTGTTGCATCATGGTGGTGGTTTAGGGAATGTGAAACCTGATGCCGGTTCGCCCTCGGAGTTTATGTAG 1926 0.4294 MKTLFSSNKSCGCIKLKSSNVLQPSQKPKISIYQNKNPKRIISSTTTSCNGNAGDENYTSTTISDDNDKNNYGILKSGTKLVDSVAIEKESDEPYEDFRSSILQMILERNIYSEKDLQELLECFLQLNAKCHHHIIVEAFMEICEKIFPKKVCGDVAGGGSGRNIEGFDGDLLPGSPGFLQVYPGFLSKSSWLFTSDKVLPQCSSLLSACLHDHRFATLHPSSPPPVHCALSLSKRKSLWTTPWVSNLRSVSATYHQVEKTFQLVVNLKPPILPPPEPPPTGFCLNLFSIDELLAIDCVFRPPPKPPWLYWACFHLAWMVFAEMPQQRFKFLDKKGLVGTLPKLKTREKKFKPIADHVNTVHHLHDPTTFPFKWSWRDVSIKVQNMRHQYIGVKHKIRLSSHSHQFNWNDGLIHWENFLNYKQVFGFEIDDSDSDDDNDNGENNDGSDHDDDDDVREEELKRLGLGVLKLREVMVKREERRREREFVKEKEEWKRKEFEFKRGECCCSGEREFELGMEETGSRWVKREIEKRVRLEKELEEEKRRRKKVEEKMEEEEMEWRERMVAMQIEHEKQMMQMHAEACQNQMQVLGVMARILCQCFGSGHDGLGGAGLGTLPPQVLHHGGGLGNVKPDAGSPSEFM 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04195 641 MobiDBLite consensus disorder prediction 432 455 - -
Trre9g04195 641 MobiDBLite consensus disorder prediction 432 454 - -
Trre9g04195 641 Pfam Transcriptional repressor, ovate 91 148 IPR006458 -
Trre9g04195 641 Coils Coil 525 570 - -
Trre9g04195 641 NCBIfam uncharacterized plant-specific domain TIGR01568 85 146 IPR006458 -
Trre9g04195 641 Coils Coil 476 496 - -
Trre9g04195 641 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-79 SPECIFIC-LIKE-RELATED 339 452 - -
Trre9g04195 641 ProSiteProfiles OVATE domain profile. 87 146 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04195 Trre-Chr9 49718861 49725151 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre9g04195 Ovate 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04195 - - vra:111241836 240.736