Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04180 ATGCAAGCGTTGTGGTTGTTCTTGAAAGAAAATGTCAAATGTGGTAACAAGCTCAATGATGTATTATGGCGGCCACAAAAATTTGGCAATAGAAGTAGCTATGTTCTAGAGAAGAAAGACAAATTGAAGAAAACCGAAGATGAAGAAGATAGTGTCCCCTTCATGAAAACTCCAACTAGACTAGCTGATTCCATGCTAAACAACACGCAGGCACGACTTTATGAGCTTGATATTGGAGATGCATCAAGAAAAATTGTTGAGATGATATATCAGAAGGCATGGATGAACACATCAAAGCCACTAAGGAAGGTTAGAACAGTTCTTCGGGTGAGATACTCCGAAAAAGTCCTTGAAATGTTTGAGAACTATAGAGAAAAAGTTAAGAAAGAGTATCCAGGGCATCCAATGAGCACATTAGATGGAAATGAAGTGTTAGGATTTTGTTTCACTTCAATGAGATGTTTCCCTGTGAATAAAGTTCATGATCTTTGTCAAGATGCATCGTGTCGTCTTTGTCAAATAATTCAATTCAATTTCGATGCAGAAAAGGCCAATGAGATTCAATTGTGTTCAAGTGAGAAAGATTTGAGTAACAGAAGTGTCAATGCAAGAGTGAAGAATGTGAAAAGAGTTTTAATAATTTGCAGAATAATTGGTGGAACTGCAGTGAATCAAGTTGATAGTAAATATGAAGAAAGGTTTGAGTCTAATTCAACTAGGCTAGGAGAAATGGAATTTACCTTAGAAAGATTTAGAGTGAAAACTCCTAGTTCTATTCTTCCTTGTTTTGCCATAATTTTTAGCTGA 807 0.3594 MQALWLFLKENVKCGNKLNDVLWRPQKFGNRSSYVLEKKDKLKKTEDEEDSVPFMKTPTRLADSMLNNTQARLYELDIGDASRKIVEMIYQKAWMNTSKPLRKVRTVLRVRYSEKVLEMFENYREKVKKEYPGHPMSTLDGNEVLGFCFTSMRCFPVNKVHDLCQDASCRLCQIIQFNFDAEKANEIQLCSSEKDLSNRSVNARVKNVKRVLIICRIIGGTAVNQVDSKYEERFESNSTRLGEMEFTLERFRVKTPSSILPCFAIIFS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04180 268 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 68 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04180 Trre-Chr9 49605637 49607742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04180 73 266 C2H2 Transcription Factor Family AT5G54630 31.336 1.06e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04180 - - tpra:123921169 382.874