Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04135 ATGTCTCATCTTTCTCTCTCCTTTCAACTCTTGTTCTTCATAGCTATTTCAATTTTCAACTTTTCTACAATCTCTTCAACCGAATTCGACTTCGGAACATTAACTCTCACAAGTCTCAAACTTCTCGGCGATGCCCATTTAAACAATGGCACCGTAACACTAACACGTGACCTCACCGTACCATTTTCCGGCGCCGGACAAGCTCTTTATTCCCGTCCAATCAAATTCCGACAACCTGGTACCACCATTCCAGCGAGCTTCACTACTTTTTTCTCTTTCTCTGTTACCAATTTGAACCCTTCTTCCATCGGTGGTGGTCTTGCTTTTGTAATTACCCCCGACGCCGATTCTCTCGGTAACGCCGGTGGTTATCTTGGTCTTGCCACCGATGGGTTTATTGCTGTTGAATTTGATACTTTAATGGACGTTGAATTTAAGGATATTAATGGGAATCATGTTGGTGTTGATCTTAATAGTGTTGTTTCTAGTAAAGTTGGTGACTTGGATTCAATTGGGGTTGATCTTAAAAGTGGTGATTCGGTTAATGCTTGGATTGAATTTGATGGATCCAATAATGGGTTTAATGTTTGGGTATCTTATTCTAATTTGAAACCTAAAGATCCAATTTTGTCAATGAATCTTGATATGGGTCAGTATTTGAATGATTTTATGTATGTTGGGTTTTCTGGTTCAACTCAAGGAAGTACAGAGATTCATAGAGTTGAATGGTGGAGTTTTAGTTCATCTTTTGTTTCGGGTTCGGGTTATTCTTCCGGTTTACCGCCTCCTCCGGCGGTTAGTTTGATGAATACGACCGCGAGTTCGGCGAGGTCACCACCTCCTTCTATGGCTCCTTCAATGAATTCTACTAATGTGGAAAGAAAAGAGAGTAAGAAGAGTTGTCATAATGGGTTGTGTAAGCAAGGTTTAGGAGCTGTTGCTGGTGTTGTTACTGCTGGTGCTTTTGTTTTAGCACTTTTTGCAGGGTCTATGATATGGTTGTATTCTAAGAAAGTGAAGCGTGTGAGTAGATTTGATTCTCTTGGATCAGAGATAATTAAAATGCCTAAGCAGTTTAGTTACAAGGAGCTTAAATCTGCTACTAAGTGTTTCAATGCTAATAGGATTATTGGTCATGGTGCATTTGGGACTGTGTATAAGGGAATTTTGACTGAGAATGGTGACATTGTTGCTGTGAAGAGGTGTAGTCATAGTAGTCAAGGAAAGAATGAGTTTTTATCTGAGTTGTCTATAATTGGTAGCCTTAGACATCGGAATCTTGTTAGACTTCAAGGATGGTGTCATGAGAAAGGTGAGATTTTGTTGGTGTATGATTTGATGCCTAACGGTAGTTTGGATAAGGCTTTGTTCGAGGCTAGAACACCTCTACCTTGGTCTCACCGTCGCAAGATTTTGTTAGGTGTAGCATCTGCTTTGGCTTACTTGCATCAAGAGTGTGAAAATCAGGTAATTCATAGAGATATTAAGACGAGTAATATAATGTTAGATGAAGGTTTTAATGCGCGTTTGGGAGATTTTGGATTAGCAAGACAAACTGAGCATGACAAGTCTCCGGATGCCACCGTGGCTGCTGGAACAATGGGATATCTAGCACCTGAGTATCTTCTCACAGGCAATATGGGGAGGGTTGTGGAACTTTTGCTTAGATCATTGTATAAGAGCCTTATGCAATTGCGCACATCTTGTTTGATATCTTCTACTGTTTCGATATGA 1734 0.4031 MSHLSLSFQLLFFIAISIFNFSTISSTEFDFGTLTLTSLKLLGDAHLNNGTVTLTRDLTVPFSGAGQALYSRPIKFRQPGTTIPASFTTFFSFSVTNLNPSSIGGGLAFVITPDADSLGNAGGYLGLATDGFIAVEFDTLMDVEFKDINGNHVGVDLNSVVSSKVGDLDSIGVDLKSGDSVNAWIEFDGSNNGFNVWVSYSNLKPKDPILSMNLDMGQYLNDFMYVGFSGSTQGSTEIHRVEWWSFSSSFVSGSGYSSGLPPPPAVSLMNTTASSARSPPPSMAPSMNSTNVERKESKKSCHNGLCKQGLGAVAGVVTAGAFVLALFAGSMIWLYSKKVKRVSRFDSLGSEIIKMPKQFSYKELKSATKCFNANRIIGHGAFGTVYKGILTENGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWSHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGNMGRVVELLLRSLYKSLMQLRTSCLISSTVSI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04135 577 MobiDBLite consensus disorder prediction 270 289 - -
Trre9g04135 577 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 264 IPR013320 -
Trre9g04135 577 SUPERFAMILY Protein kinase-like (PK-like) 352 545 IPR011009 -
Trre9g04135 577 FunFam Os07g0541700 protein 447 533 - -
Trre9g04135 577 ProSitePatterns Protein kinases ATP-binding region signature. 377 400 IPR017441 GO:0005524
Trre9g04135 577 SMART serkin_6 371 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04135 577 CDD lectin_legume_LecRK_Arcelin_ConA 43 244 IPR001220 GO:0030246
Trre9g04135 577 Pfam Protein kinase domain 372 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04135 577 FunFam L-type lectin-domain containing receptor kinase VIII.1 25 258 - -
Trre9g04135 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Trre9g04135 577 Gene3D - 24 256 - -
Trre9g04135 577 PANTHER - 49 545 - -
Trre9g04135 577 FunFam L-type lectin-domain containing receptor kinase VIII.1 335 446 - -
Trre9g04135 577 Gene3D Transferase(Phosphotransferase) domain 1 447 552 - -
Trre9g04135 577 Gene3D Phosphorylase Kinase; domain 1 334 446 - -
Trre9g04135 577 ProSiteProfiles Protein kinase domain profile. 371 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g04135 577 Pfam Legume lectin domain 27 249 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04135 Trre-Chr9 49216241 49219183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04135 6 545 Receptor kinase-like Gene Family AT3G53380 71.014 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre9g04135 Lectin_legB 2.4e-55 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04135 - - gmx:100793157 821.231