Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04126 ATGTTGATTGAAATTGCAGTTGCATTATTCATCATTGCTCTGTTTATCCATTTGCGTCCAACTCCTTCCGCCGCTAAATCAAAAGCACTTCGTCACCTTCCAAATCCTCCAAGTTCAAAACATCGTCTTCCATTCATTGGTCATCTTCATCTTTTAGATAACCCTCTTCTTCACCATTCTCTTATCCGTTTAGGAGAACGTTATGGTCCCTTGTACTCTTTGTACTTCGGTTCGGTGCCTACCATAGTAGCGTCCACCCCTGATTTGTTTAAACTGTTTCTTCAAACACATGAAGTTACTTCCTTTAACACAAGATTCCAAACCTCTGCTATAAAACGTTTAACCTATGATAACTCTGTTGCTATGGTTCCTTTTGGACCTTACTGGAAGTTCATCAGGAAACTTATTATGAACGATCTTCTTAATGCTTCCACCATCAACAAGTTGAGACCTTTAAGGAGCAAAGAGATTCTTAAGTTTCTTAATGTTACGGCTAAAAGTGCTGAAACTCAACAGCCACTTAATATAACTGAGGAGCTTCTTAAATGGACAAATAGTACAATCTCAACCATGATGTTGGGTGAGGTTGAAGAGGTTAGAGATATTGCTCGTGATGTTGTTAAGATCTTTGGGGAATATAATGTTACTGATTTTATTTGGCCTTTGAAGTTTTTTAAAAAATTTGGGAACTATGAGAAGAGAATTGATGATATTTTTAATAAGTATGATCCTATTATTGAAAAGGTTATCAAGAAAAGACAAGAGATTGTGAACAAAAGAAGGAGTGGAGAAATTCATGAGGGTGAGGTGGAGAGTAGTGTAGTTTTTCTTGATACTTTGCTTGAATTTGCTCAGGATGAGACCATGGAGATCAAAATTACCAAGGAACAAATCAAGGGTCTTGTTGTGGATTTCTTCTCCGCTGGCACAGACTCCACAGCTGTGGCAACAGAATGGACTTTAGCCGAGCTCATCAATAATCCAAGGGTGTTGAAGAAAGCTCAGGAGGAGATTGAATCTGTTGTGGGAAAAGATAGACTTGTTGATGAATCAGATGTGCAAAATCTTCCTTACATTAGAGCTATTGTGAATGAGGCATTCCGCTTGCATCCACCACTACCATTGGTTACGAGAAAATGTACTGAAGAGTGTGAAATTAACGGCTATGTGATCCCAAAGGGAGCATTGATACTTCTCAATGTATGGCAAGTTGGAAGAGACCCAAAATATTGGGAGAAGCCATTGGAATTCCGTCCAGAGAGGTTCTTAGAAAATGCTGGTGAAGGTGAAGCAGCTGCAGTTGATCTTAGGGGTCAATATTTCACACTTCTACCATTTGGGTCTGGAAGGAGAGTGTGTCCTGGAGTAAATTTGGCTATAGCAGGAATGGCCACACTACTTGCATCTATTATCCAGTGCTTTGATCTACAAGTACCAGGTCCACATGGACAAATATTGAAAGGTGGTGATGCTAAAGTTAGCATGGATGAGAGACATGGTCTCGCAGTTCCAAGAGCACATAATCTCGTGTGTGTTCCAGTTGCAAGAGGTGGTGTTGCATCTCAAATCCTTTCGTCCTAA 1581 0.3991 MLIEIAVALFIIALFIHLRPTPSAAKSKALRHLPNPPSSKHRLPFIGHLHLLDNPLLHHSLIRLGERYGPLYSLYFGSVPTIVASTPDLFKLFLQTHEVTSFNTRFQTSAIKRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNASTINKLRPLRSKEILKFLNVTAKSAETQQPLNITEELLKWTNSTISTMMLGEVEEVRDIARDVVKIFGEYNVTDFIWPLKFFKKFGNYEKRIDDIFNKYDPIIEKVIKKRQEIVNKRRSGEIHEGEVESSVVFLDTLLEFAQDETMEIKITKEQIKGLVVDFFSAGTDSTAVATEWTLAELINNPRVLKKAQEEIESVVGKDRLVDESDVQNLPYIRAIVNEAFRLHPPLPLVTRKCTEECEINGYVIPKGALILLNVWQVGRDPKYWEKPLEFRPERFLENAGEGEAAAVDLRGQYFTLLPFGSGRRVCPGVNLAIAGMATLLASIIQCFDLQVPGPHGQILKGGDAKVSMDERHGLAVPRAHNLVCVPVARGGVASQILSS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04126 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Trre9g04126 526 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 SUPERFAMILY Cytochrome P450 31 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 Gene3D Cytochrome P450 25 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g04126 526 PANTHER STEROID 21-HYDROXYLASE-RELATED 9 506 - -
Trre9g04126 526 Pfam Cytochrome P450 37 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04126 Trre-Chr9 49143556 49146046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04126 32 521 Cytochrome P450 AT5G06900 37.725 1.24e-111 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04126 K23179 - gmx:100037450 828.55