Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04115 ATGAATGAGGATGCGCAACAGGCCCAAGGGGAAGTTCACCTGCCAAGGTGGCTTGAGGATTTTTTGGCGCAAAAGTTCTCTGACTCTTGTCCTGCTCATTCGAAAGAGAGGAATATATACTGCATAAATTGCAAATTATCTGCTTGTAAACATTGTATGTCATCAGGATCTCATGAAGATCACCGGATACTGAGAATCTATAAGAATAATTACAGGGATGGCGTCTGCCTGGCTGCTATGAAGACATATATCGATTGCTCCCAGATCCAGTCGTTCAAATGCAACAACCTAAGGGTTCTGAATCGTAGTCCGCGTTGTGGATCAACATTGGATTATGCAAAATCATGCAACAATGGCAGCAGAAAATCGAAAGAAGCTAAAGCATATCAGTACTGCTCCATAACTTGCATGGTGAAAGCTGCAAGAAAGTCTTCAATTCCTCCCATTGCTTCCATCCAGGCTCCTCCTTGTCAAGAATCACCGGGGGAAATTTGTGTGCCCTCTAAGCGAAAGAGGAAACGTAAAGGAATTCCGCATAGAGCTCCGTTGTTCTAA 555 0.4378 MNEDAQQAQGEVHLPRWLEDFLAQKFSDSCPAHSKERNIYCINCKLSACKHCMSSGSHEDHRILRIYKNNYRDGVCLAAMKTYIDCSQIQSFKCNNLRVLNRSPRCGSTLDYAKSCNNGSRKSKEAKAYQYCSITCMVKAARKSSIPPIASIQAPPCQESPGEICVPSKRKRKRKGIPHRAPLF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04115 184 Pfam PLATZ transcription factor 68 138 IPR006734 -
Trre9g04115 184 Pfam B-box zinc finger 28 64 IPR000315 GO:0008270
Trre9g04115 184 Gene3D Classic Zinc Finger 29 68 - -
Trre9g04115 184 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 183 - -
Trre9g04115 184 SUPERFAMILY B-box zinc-binding domain 28 66 - -
Trre9g04115 184 ProSiteProfiles Zinc finger B-box type profile. 25 66 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04115 Trre-Chr9 49053206 49055142 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre9g04115 PLATZ 6.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04115 - - tpra:123919466 331.257