Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04094 ATGATGCAAATATTTCTCTTCAAAATCCTTCTATTTTCTATGACACTTTTTCTTTCAGAATCATCAACCACAAACCTCTTCTTATACGGTGGTTGCTCACAACAAATGTACACACCAAACTCACCTTATGAGTCAAACCTCAATTCACTCCTCACTTCCTTAGTCAACTCAGCAACATACTCATCTTACAACAACTTCACCGTACTAGGGTCCACCCAACAAGACATAATCTACGGCCTCTACCAATGCCGCGGCGACCTCGCCATGCCCGATTGTGCTTCTTGTGTCGCACGCGCTGTCACTCGCGCGGGCGACATGTGCCGCAACACGTGCGGAGGCACGGTTCAACTTGATGGTTGTTTGATAAAGTATGATAATGCTACTTTTTTGGGTGTGGAGGATAAGAATGTTTTGTTGAAAAAGTGTGGGCCTTCTGTGGGCTATAATCCAGAGGCTATGGGCTCAAGAGATGCTGTGCTTGGTGGGCTTTTGGGCTTAGGTGGGCCTTTTAGGGTTGGTGGGTCGGGTATGGTTCATGGTGTGGCCCAGTGTACTGGGGATCTTAGTTTTGGAGAGTGTCAAGATTGTATTGCTGAAGCAATTGGACGGTTGAAAAGTGATTGTGGGACCGCGGATTACGGAGATTTGTTTTTGGGTAAATGTTATGCGAGATATTCTACGGGTGAATCCCATGATACTTCTCAGGCCCATGGAAAATCGGATAAAGAAGGTGAAAAGAAATTTGCATTAATCATTGGATTATTAGCAGGAGTAGCCATACTTGTTATTCTCCTTGCTTTCTTAAGCAAGATTTGTAGGCGACAAGGTAAGTAG 834 0.4472 MMQIFLFKILLFSMTLFLSESSTTNLFLYGGCSQQMYTPNSPYESNLNSLLTSLVNSATYSSYNNFTVLGSTQQDIIYGLYQCRGDLAMPDCASCVARAVTRAGDMCRNTCGGTVQLDGCLIKYDNATFLGVEDKNVLLKKCGPSVGYNPEAMGSRDAVLGGLLGLGGPFRVGGSGMVHGVAQCTGDLSFGECQDCIAEAIGRLKSDCGTADYGDLFLGKCYARYSTGESHDTSQAHGKSDKEGEKKFALIIGLLAGVAILVILLAFLSKICRRQGK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04094 277 FunFam Cysteine-rich repeat secretory protein 60 150 228 - -
Trre9g04094 277 Gene3D - 167 229 IPR038408 -
Trre9g04094 277 Gene3D - 24 129 IPR038408 -
Trre9g04094 277 FunFam cysteine-rich repeat secretory protein 3 24 129 - -
Trre9g04094 277 Pfam Salt stress response/antifungal 32 126 IPR002902 -
Trre9g04094 277 Pfam Salt stress response/antifungal 175 227 IPR002902 -
Trre9g04094 277 ProSiteProfiles Gnk2-homologous domain profile. 130 230 IPR002902 -
Trre9g04094 277 ProSiteProfiles Gnk2-homologous domain profile. 25 129 IPR002902 -
Trre9g04094 277 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04094 Trre-Chr9 48867095 48868544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04094 14 225 Pollen Coat Proteome AT4G20670 25.541 2.42e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04094 - - tpra:123920710 443.736