LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre9g04071	ATGTCAAAGGGAGACAGTGTGAATGTTTTGGACTTTTGGGCTAGCCCTTTTTGTGCTAGAGTGAAGATTGCTTTGGAAGAGAAAAATGTGAACCATGTTGATAATGAAGAGGATATATTTGGAAGAAAAAGTGAGCTTCTTTTGAATTCAAATCCTATTCACCAAAAGGTGCCTGTGTTCTTGCACAATGACAAACCTGTCCTTGAATCTGCTATCATTGTTAACTATATTGATGAAGTGTGGCCTGAAAACTCATTGCTTCCATCTAATGCCTATGATCGTGCACAAGCTAGATTTTGGGCTGATTTCATTGACAAAAAGGTATTTGACACTGGGAGGAGCATTTGGGCTAGCAATGGAGAAGAGAGAGAAGTAGGAACAAAGGACTTCATTGAAGTTTTAAAGCATCTAGAAGAAGCTCTTGGAGAGAAAGATTACTTTGGTGGTGATACCTTTGGCTATGTTGATATCATAGCCATTCCTCATTCTGCATGGTTTTTAGCTTATGAGAAGCTTGGAGGTTTCAAAGTTGAAGATCATTCCCCAAAAATCGCTGCTTGGATTAAAAGGTCTTTGGAAAGAGAATCTGTGAAAAAGGTTCTTCCTGACCCAGAAAAGGTTTACCAGTTTGTCCTTCATTTCAGGAAGATGTCAGGACTTGAATGA	666	0.3904	MSKGDSVNVLDFWASPFCARVKIALEEKNVNHVDNEEDIFGRKSELLLNSNPIHQKVPVFLHNDKPVLESAIIVNYIDEVWPENSLLPSNAYDRAQARFWADFIDKKVFDTGRSIWASNGEEREVGTKDFIEVLKHLEEALGEKDYFGGDTFGYVDIIAIPHSAWFLAYEKLGGFKVEDHSPKIAAWIKRSLERESVKKVLPDPEKVYQFVLHFRKMSGLE	221

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre9g04071	221	FunFam	Glutathione S-transferase U20	90	221	-	-
	Trre9g04071	221	SUPERFAMILY	GST C-terminal domain-like	79	217	IPR036282	-
	Trre9g04071	221	Pfam	Glutathione S-transferase, N-terminal domain	7	79	IPR004045	-
	Trre9g04071	221	CDD	GST_N_Tau	7	81	-	-
	Trre9g04071	221	Pfam	Glutathione S-transferase, C-terminal domain	128	190	-	-
	Trre9g04071	221	SUPERFAMILY	Thioredoxin-like	11	108	IPR036249	-
	Trre9g04071	221	CDD	GST_C_Tau	91	214	IPR045074	GO:0004364\|GO:0006749
	Trre9g04071	221	FunFam	Glutathione S-transferase GSTU6	2	88	-	-
	Trre9g04071	221	Gene3D	-	90	221	-	-
	Trre9g04071	221	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	9	209	IPR045073	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre9g04071	Trre-Chr9	48674192	48675694	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre9g04071	4	221	Glutathione S-transferase Gene Family	AT1G17180	56.621	8.95e-85	249

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre9g04071	K00799		-	gmx:100782914	396.356

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