Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04069 ATGCATGAATATCGTCTAGATGAGAGGGAATGTGAAACCACTCCAAGCTTGCAGGATGCGTATGCTCTTTGTCGTGTGATCAAGAAGAGTACAGTGATTGTGCCAAAAGTTGGAGGACAATATAGTAATCTTACAAGCCATGCCAACCAGATTACAATCAACCAATCACCAAACGTTGAGCAATACTCTGAAGGAAGGGGTGAAGATTTAGAAAGTTCAAATTATTTGATGCAAATGAATGCTTGTTCATCTCACAATATGGGAAGTGAGACTTCTCTCAATATCAATGGTGGGATAAGGGATCATGGAAATTGGTCACAATCCTCATATGATCAAGGGCCATTTTTGAGTCCTCCAACTTCTTCATTTTCTAATTATGGAGCTATAACATACCCTCCGTCCAAGATGGATATTGCACTAGAGTGTGCAAGGATGCAACATAAGTTCTCTATGTCTCCATTGGAGGTGGAGGACATTCCTCAAGGAAGCAGAACTAAAAATGATGTCTTGGAAGAAATTCTTTCACTTAATCATGCTTCTCAGGAATTGACGAATCACTCAAGTTATTCACAAGCATTGGGTGACAATGAAAATTATGCTCCATATGAAGATGATTTTACTTTCATGGTTAGCACTAACTACAATCACATAAATGATATGAGCTCCATGAGTTATGTTAACAAGACTTGGGAAAATTTGAACACAAGATCCATAGAGATAGGTTGTCTAGAGGATCAAGAGTTAAAGGCAAAGAGGATGGTAGAGAATTTGAGATGGATTGGAATGCCAAGAGAAGATTTTGAAAAGATGGAACAAAAGATTGTCCCAATCGAGGATATTTCATGCTTCCAAACTTTAAGGGAACAAAATGGCATGCAAGAATATGAGCAAAACTATGGCAACCTTGAGCAAAATGACACTTATGTCAATGAATTCTCATTAGGCTTCATTAATGATGGTGACCCTAATGAAAATTTTATAGAAGATGGTAACATGGATGATTACTCAAATTCTCCAAGCTTTGAGGTCATTGAAGAAATAAAGGTTAGTCATGGAATGTTGGTTTCAACTCAACCAGTAGCCATGACAATGTTTCACCAAGTTGTTCCTTCACAAACTCTCCAAGTTCAACTCAATCCAATGATGGCAAATAAAAACAACTCTATAGAGAATGTAGAGGCAGTGATGATGATAATGGAGAATCAAGGGTCTTTCTTTAGGAAGTTTAAGTCTCATATGATGGGGAAGTGGAACCTATTCAATCCATCAAAGAAAATAGCAAGTTTGGTTGTATTTGTATTTTCACTTCTTTTGATGCATTGTGTTTATTTGGAGGAAGAAGTGGAAATAATATGCAAACCAAACTCAAATAATGTTGAAGAGAAAAGAATGAGAGAATCATGTGAGAGAATCAATTGGAATGAGGCAAAAGAGGTTTGGTTTGTTGGTGTTAAAAGTGAGAAAGGATTAAGTGTGGTCTTGAAGAAAATAGGCATTTTCCTCACCATATCTTTGGTTCTTTGTACCATGTGGGCTAGCCATAGTTAA 1548 0.3702 MHEYRLDERECETTPSLQDAYALCRVIKKSTVIVPKVGGQYSNLTSHANQITINQSPNVEQYSEGRGEDLESSNYLMQMNACSSHNMGSETSLNINGGIRDHGNWSQSSYDQGPFLSPPTSSFSNYGAITYPPSKMDIALECARMQHKFSMSPLEVEDIPQGSRTKNDVLEEILSLNHASQELTNHSSYSQALGDNENYAPYEDDFTFMVSTNYNHINDMSSMSYVNKTWENLNTRSIEIGCLEDQELKAKRMVENLRWIGMPREDFEKMEQKIVPIEDISCFQTLREQNGMQEYEQNYGNLEQNDTYVNEFSLGFINDGDPNENFIEDGNMDDYSNSPSFEVIEEIKVSHGMLVSTQPVAMTMFHQVVPSQTLQVQLNPMMANKNNSIENVEAVMMIMENQGSFFRKFKSHMMGKWNLFNPSKKIASLVVFVFSLLLMHCVYLEEEVEIICKPNSNNVEEKRMRESCERINWNEAKEVWFVGVKSEKGLSVVLKKIGIFLTISLVLCTMWASHS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04069 515 Coils Coil 382 402 - -
Trre9g04069 515 ProSiteProfiles NAC domain profile. 1 29 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04069 Trre-Chr9 48653377 48656701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04069 1 443 NAC Transcription Factor Family AT1G65910 31.263 2.27e-51 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04069 - - tpra:123920692 809.29