Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04049 ATGGAGCATGAAGAAGGAAGCTTTGAAAGCTTCTTAACATGGACATCATCACACTTAGGAATTTCAGATTCAACAACAACAACTACTACCAATCAATCTCATCACTCTTTGGGTCATTCTTTATGCGTTTCTATCTTTCCTCACTCTGGCGGTAGAGGTTTGGGTGCTGTAAGAGATCTTAAAAAGGGAGAACTTATTCTAAAAGTTCCAAAATCTGCTTTATTGACTAGTGAGATTACCATGCAAGATAAAAAACTTCATCTTGCTGTTAATAGACACTCTTGTCTTTCCTCAGTTCAGATATTGACTGTTTGCTTGTTATACGAAGTCGGTAAAGGAAAAACTTCAAGGTGGCATCCTTACCTTGTGCATTTGCCGCAAAGTTATGACCTGCTAGCCATGTTTGGTGAATTTGAGAAACAAGCTCTGCAAGTGGATGAAGCAATGTGGGTCACAGAAAAAGCTGTACAAAAAGCCAAATCAGAATGGAAAGAAGCTCTTGCCTTGATGGAAGATCTCATGTTTAAGCCTCAACTTTTATCATTTAAGGCTTGGGTTTGGGCTGCTGCAACGATATCTTCCCGGACATTGCATATACCCATGGGATGA 609 0.3974 MEHEEGSFESFLTWTSSHLGISDSTTTTTTNQSHHSLGHSLCVSIFPHSGGRGLGAVRDLKKGELILKVPKSALLTSEITMQDKKLHLAVNRHSCLSSVQILTVCLLYEVGKGKTSRWHPYLVHLPQSYDLLAMFGEFEKQALQVDEAMWVTEKAVQKAKSEWKEALALMEDLMFKPQLLSFKAWVWAAATISSRTLHIPMG 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04049 202 Pfam SET domain 51 195 IPR001214 GO:0005515
Trre9g04049 202 Gene3D set domain protein methyltransferase, domain 1 5 202 - -
Trre9g04049 202 CDD SET_LSMT 50 202 - -
Trre9g04049 202 SUPERFAMILY SET domain 35 200 IPR046341 -
Trre9g04049 202 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04049 Trre-Chr9 48540052 48543028 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre9g04049 SET 0.00013 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04049 - - tpra:123923746 348.977