Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04023 ATGGTGAACCTTTTCTGGGATTGCATTGTTATAGGATTTGTTTTCATCAACTGGGTTCATGCTTATCACATCAATGAAACTGAACTCTCTATCTTAGAATCTCATGAAGCTTCTTTTTCATTTGCTGTGGCTCAACCTCATATGGTTGGAATCACCATTATTCAATCTGCTGCTGCTAAAGGAGCTGTCTGCTTGGATGGAACATTGCCTGCTTATCATTTTGATCGCGGATACGGATCAGGAGCAAACAGCTGGCTCGTTAATTTAGAGGGTGGTGGATGGTGTAATAATGTTAGAACATGCGTTTATCGCAAGACAACACGGCGTGGATCATCAAAATTCATGGAAAAAGCGTTACCTTTTACGGGAATATTAAGCAATAATCCTCAAGAGAATCCAGATTTTTTTAACTGGAATAGGGTGAAAATTCGTTACTGTGACGGTGCCTCTTTTACCGGGGATAGCGAAGATAGGGCTGCACAATTGCAATTCAGAGGACAACGCATTTGGTTGGCTGCAATTGAGGAATTGATGTCAAAAGGAATGCGTTTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCAGCCGGTGGTTTGGCTACTATTTTACACTGCGATGAATTTCGAGGTCTATTCCCGGGGACTACCAAAGTGAAGTGTCTTAGTGATGCTGGCTTATTTCTTAATGCTGTTGATGTAGCTGGTGGACATACCCTCAGGAATTTTTTCAACGGTGTTGTAATGCTACAGGGAGCGCAGAAGAATCTTCCACGGAGTTGTACTAATCATCTTGATCCCACCTCGTGCTTCTTTCCTGAGAATTTGATTGCCAGTATCAGAACTCCGCTATTCATTCTTAATACTGCCTATGATTCATGGCAGATCCAGTCAAGCTTAGCTCCTCCGTCGGATGATCCTCACGGCTATTGGCATGATTGCAGATTAAACCATGCTAAATGTACTGGTTCACAAATCCAATTTCTGCAAGGATTCAGGAATCACATGCTGAATGTTGTTAGAGGCTTCTCAAGATCAAATCAAAATGGATTGTTCATAAATTCATGCTTTGCTCACTGCCAATCTGAGAGGCAAGACACATGGTTTGCTGACAACTCTCCTGTCATTGGGAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTTAACCGAGCCGCTGTTAAGGACATTGATTGTCCTTACCCTTGTGATAACACATGCCACCATCTAGTTTTCAGATGA 1239 0.4262 MVNLFWDCIVIGFVFINWVHAYHINETELSILESHEASFSFAVAQPHMVGITIIQSAAAKGAVCLDGTLPAYHFDRGYGSGANSWLVNLEGGGWCNNVRTCVYRKTTRRGSSKFMEKALPFTGILSNNPQENPDFFNWNRVKIRYCDGASFTGDSEDRAAQLQFRGQRIWLAAIEELMSKGMRFAKQALLSGCSAGGLATILHCDEFRGLFPGTTKVKCLSDAGLFLNAVDVAGGHTLRNFFNGVVMLQGAQKNLPRSCTNHLDPTSCFFPENLIASIRTPLFILNTAYDSWQIQSSLAPPSDDPHGYWHDCRLNHAKCTGSQIQFLQGFRNHMLNVVRGFSRSNQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFNRAAVKDIDCPYPCDNTCHHLVFR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04023 412 PANTHER NOTUM-RELATED 45 408 IPR004963 GO:0016787
Trre9g04023 412 Pfam Pectinacetylesterase 44 391 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04023 Trre-Chr9 48236128 48239576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04023 1 412 Carbohydrate Esterase AT1G57590 65.468 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g04023 K19882 - gmx:100788448 719.924