Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03951 ATGGATCTACTCCTTCTTGAAAAGACTCTTTTATCCCTCTTCATCGCCGCTATAATCGCAATCACAATCTCAAAACTCCGTGGAAAACGCTTCAAACTTCCACCAGGTCCATTTCCAGTTCCAATTTTTGGTAATTGGCTTCAAGTTGGCGATGATCTCAACCACCGTAATTTAACCGATTTAGCCAAACGGTTCGGCGAAATCCTGCTTCTCCGGATGGGACAACGAAACCTGGTCGTTGTCTCATCACCGGAGTTAGCAAAAGAAGTCCTTCACACACAAGGTGTCGAATTCGGTTCCAGAACACGGAACGTCGTATTCGACATCTTTACTGGTAAAGGACAGGACATGGTTTTCACCGTGTACGGTGAACATTGGCGTAAAATGAGGAGAATTATGACAGTACCATTTTTCACAAACAAAGTTGTTCAACAATATAGATTTGGTTGGGAATCTGAAGCTGAAAGTGTTGTTAATGATGTTAAGAAAAATAATGAAGCTAGTGTTGGTGGAATTGTGATTAGAAGAAGATTACAATTGATGATGTATAATATTATGTATAGGATTATGTTTGATAGAAGATTTGAAAGTGAAGAAGATCCTTTGTTTGTGAAATTGAAAGCTTTGAATGGTGAAAGGAGTCGTTTAGCTCAAAGTTTTGAGTATAATTATGGTGATTTTATTCCAATTTTGAGACCTTTTTTGAAAGGTTATTTGAAGGTTTGTAAAGAGGTTAAGGATCGTAGGTTGCAGCTTTTCAAAGACTATTTCGTTGATGAGAGAAAGAAGCTTGAAAGTACCAAGAGCACCACTAGCAATGATGGACTTAAATGTGCTATTGATCACATTTTGGATGCTCAAAAGAAGGGAGAGATCAATGATGACAACGTTCTTTACATTGTCGAGAACATCAATGTTGCTGCAATTGAAACAACACTATGGTCAATTGAATGGGGAATTGCTGAGCTAGTGAACCACCAAGGGATCCAAAACAAAGTAAGGGAAGAGATGGACAGAGTTCTAGGACCAGGACACCAAGTAACCGAGCCGGATCTTCAGAAGCTACCTTACCTACAAGCCGTGATCAAAGAGACACTTCGTCTACGAATGGCAATTCCACTCCTCGTCCCACACATGAACCTTCATGATGCAAAGCTTGCCGGTTATGACATCCCGGCCGAGAGCAAGATATTGGTCAACGCGTGGTGGCTTGCAAATAACCCGGCTCTATGGAAAAAGCCGGAGGAATTTAGGCCTGAGAGGTTCTTGGAGGAAGAGGCGCATGTTGAGGCTAATGGAAATGACTTTAGGTACCTTCCTTTCGGTGTTGGTAGAAGGAGTTGTCCTGGAATTATTCTTGCTTTACCTATCCTTGGTATTACTATCGGGCGTCTTGTTCAGAATTTCGAGCTTTTGCCTCCACCCGGACAATCTAAGATTGATACTTCCGAGAAAGGAGGACAGTTTAGTTTGCACATACTCAAACATTCCACCATTGTTGCTAAGCCAAGATCATTTTAA 1521 0.4122 MDLLLLEKTLLSLFIAAIIAITISKLRGKRFKLPPGPFPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAESVVNDVKKNNEASVGGIVIRRRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKVCKEVKDRRLQLFKDYFVDERKKLESTKSTTSNDGLKCAIDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQGIQNKVREEMDRVLGPGHQVTEPDLQKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03951 506 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 Gene3D Cytochrome P450 23 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Trre9g03951 506 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 FunFam Trans-cinnamate 4-monooxygenase 23 498 - -
Trre9g03951 506 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
Trre9g03951 506 CDD CYP73 63 497 - -
Trre9g03951 506 Pfam Cytochrome P450 34 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03951 506 SUPERFAMILY Cytochrome P450 34 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03951 Trre-Chr9 47599954 47604076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03951 1 505 Monolignol Biosynthesis Gene Families AT2G30490 84.158 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03951 K00487 - cave:132189081 908.286